Cervus canadensis (wapiti): 122420078
Help
Entry
122420078 CDS
T07554
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122420078 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccad01007
]
122420078 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccad03016
]
122420078 (KARS1)
Enzymes [BR:
ccad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
122420078 (KARS1)
Amino acid related enzymes [BR:
ccad01007
]
Aminoacyl-tRNA synthetase
Class II (A)
122420078 (KARS1)
Transfer RNA biogenesis [BR:
ccad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122420078 (KARS1)
Prokaryotic type
Other AARSs
122420078 (KARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
122420078
NCBI-ProteinID:
XP_043290758
LinkDB
All DBs
Position
18:61883227..61897086
Genome browser
AA seq
622 aa
AA seq
DB search
MLMQATVRLVRGSMRQTSWAQWGQRELRLCQLAPFTTIHKDKPLSDKRSELKRRLKAEKK
IAEKEAKQKELSEKQLSQAATNHSADDGVAAEEESLDPNQYFKIRSQAVHQLKVNGEDPY
PHKFHVDISLTHFIQEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQ
VMANSRNYKSEEEFIRINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPH
LHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIP
GGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGFDRVYEIGRQFRNEGIDLTHNPEF
TTCEFYMAYADYHDLMEITEKMIAGMVKHITGSYKVTYHPDGPEGQAYEIDFTPPFRKIS
MVEELEKALGMKLPETNLFETEETRRILDDICVAKDVECPPPRTTARLLDKLVGEFLEVA
CINPTFICDHPQIMSPLAKWHRSKKGLTERFELFVMKKEICNAYTELNDPVRQRELFEEQ
AKAKAAGDDEAMFIDETFCTALEYGLPPTGGWGMGIDRVAMFLTDSNNIKEVLLFPAMKP
EDKKENVATTDGPESTAPGTSV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcaagccactgtaaggcttgttagggggtccatgcgccaaacctcctgggca
cagtgggggcagagggagctgcgcctgtgtcaacttgctcctttcacaacgattcacaag
gacaagccactttctgataaaagaagtgagctaaagagacgcctgaaagctgagaagaaa
atagcggagaaggaggccaagcagaaggagctcagtgagaaacagctgagtcaggccgcc
accaatcacagtgctgacgatggcgtggctgcggaggaggagagcttggacccaaatcaa
tacttcaaaatccgaagccaagcagtccaccagctgaaggtcaatggggaagatccatac
ccacacaagttccacgtggacatctcgctcactcacttcatccaagagtacagtcacttg
cagcctggggaccacctgactgacatcaccttaaaggtggcaggtaggatccatgccaaa
agagcttctggaggaaagctcatcttctatgaccttcgaggagagggggtcaagttgcaa
gtcatggccaattccaggaattacaaatccgaggaagaatttattcgtattaacaacaaa
ctgcgccggggagacatcattggagtccagggcaatcctgggaaaaccaagaagggcgag
ctaagcatcatcccctatgaaatcacactgctgtctccttgcctgcacatgttgcctcac
cttcacttcggcctcaaagacaaggaaacacggtatcggcagagatatttggacttgatc
ctgaatgactttgtgaggcagaaattcatcatccgctccaagatcatcacgtatataaga
agtttcttggatgaactgggattcctagagattgaaactcccatgatgaacatcatccca
gggggagctgtggccaagccttttatcacctaccacaatgaactggacatgaatttatat
atgagaattgctccggaactctaccataagatgctggtggttggtggcttcgaccgggtg
tatgaaattggacgccagttccggaatgaaggaattgatttgactcacaatcctgagttc
accacctgtgaattctacatggcctatgccgactatcatgatctcatggaaatcacagag
aagatgattgcagggatggtgaaacacattacaggcagttacaaggtcacctaccatcca
gatggcccagaaggccaagcctatgagattgacttcaccccgcccttccggaaaatcagc
atggtagaagagcttgagaaagccctgggcatgaaactgccagaaacgaaccttttcgaa
actgaagaaactcgcagaatccttgatgatatctgtgtggcaaaagatgtcgagtgtcct
ccaccccggaccaccgccaggctccttgataagcttgtcggggagttcctggaggtggcg
tgcatcaatcctaccttcatctgtgatcacccacagataatgagccctctggccaaatgg
caccgctctaaaaagggtctgactgagcgctttgagctgtttgtcatgaagaaggaaata
tgcaatgcctacactgagctgaacgaccctgtgcgacagcgggagctctttgaagaacag
gccaaggccaaggccgctggcgacgacgaggccatgttcatagatgaaaccttctgcact
gccctggagtacgggctgccccccacgggcggctggggcatgggcatcgaccgcgtcgcg
atgtttctcacagactccaataacatcaaggaagtgcttctgtttcctgccatgaaacct
gaagacaagaaggagaatgtagccaccacggatggcccggaaagcacagcacccggcact
tctgtctag
DBGET
integrated database retrieval system
