Cervus canadensis (wapiti): 122420089
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Entry
122420089 CDS
T07554
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04137
Mitophagy - animal
ccad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122420089 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122420089 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122420089 (AMFR)
Enzymes [BR:
ccad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
122420089 (AMFR)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122420089 (AMFR)
Multi subunit type E3
ERAD complex
122420089 (AMFR)
LMBR1L-GP78-UBAC2 complex
122420089 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-RING_16
SVIP
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
122420089
NCBI-ProteinID:
XP_043290767
LinkDB
All DBs
Position
18:complement(41442816..41482952)
Genome browser
AA seq
647 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTGLSGLALLGTIVSAYRALSQPEAGPGPGPTEAEPVTAPVQPD
PAALVRPSAGGPRARDVAQYLLSDSLFVWVLVNTACCILMLVAKLIQCIVFGPLRVSERQ
HLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSP
TTPMSSHGRVLSLLITMLLSCCGLAVVCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILR
YVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFM
QLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPC
GHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDHPGENLDENLVPVAAAEGRPRLN
QHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLV
LQDLQLTRSVEITTDNILEGRMQVPFPTQRSESIRPALNSPVERPNGEQEDGEASVQTER
VPLDLSPRLEEALDFSELEAEPSEGEDFEARGSRFSKSADERQRMLVQRKDDLLQQARRR
FLNRSSEDDSASESCLPSEGTTSDPVTLRRRMLAAAAERRLQKQQTS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctcgagcgcttcccctggcccagcctccgcacctacacgggcctc
agcggcctggccttgctcggcaccatcgtcagcgcctaccgcgctctcagccagcccgag
gccgggcccgggcccgggcccaccgaggcggagccggtaacggccccagtgcagccagac
ccggccgcgctcgtccggccgagcgccgggggaccccgggcccgcgacgtggcccagtac
ctgctctcggacagcctgttcgtgtgggttctagtaaatactgcttgctgcattttgatg
ttggtggctaagctaatccagtgtatcgtgtttggcccgcttcgagtgagcgaaagacag
cacctcaaagacaagttttggaattttattttctacaagttcattttcattttcggtgtg
ctgaatgtccaaacggtggaagaagtggtcatgtggtgcctctggtttgctggactagta
tttctgcacctgatggttcagctctgcaaggaccggtttgaatatctttctttttctccc
accacccccatgagtagccacggccgagttctgtccctcctgatcaccatgctgctttcc
tgctgtgggttagcagttgtctgttgcgtcacaggctacacccatgggatgcacacgttg
gctttcatggctgcagagtctcttcttgtgacagtgaggactgctcatgtgattttacga
tatgtaattcacctctgggacctcaaccatgaagggacatgggaaggaaaggggacgtat
gtctattacacagattttgtcatggagctcactctcttgtccttggacctcatgcaccat
attcacatgttgttatttggcaacatctggttgtccatggccagcttggtcatcttcatg
cagctgcgttacctgtttcatgaagtacagcgtcgcatccgccggcacaagaactatttg
cgagtggtcggaaacatggaagccaggtttgcagtggcaactccagaggagctggctgtc
aataacgatgactgtgccatctgctgggactccatgcaggctgcgaggaaactgccctgt
ggacatcttttccacaactcctgtcttcgttcctggctagagcaagacacctcctgcccc
acatgcaggatgtctcttaacattgctgacaataatcgtgtccgggaagaccatccagga
gagaacctggatgagaatttggttcctgtggcggcagccgaaggcagacctcgcttaaac
caacacaatcacttcttccacttcgacgggtcccggatcgcgagttggctgccgagcttc
tcagttgaagtgatgcacaccaccaacattctaggcattacgcaggcaagcaactcccag
ctcaatgcaatggctcatcagatccaagagatgtttccccaggtgccataccacctggta
ctacaagacctgcagctgacgcgctcggttgaaataacaacagacaacattctggaagga
cggatgcaagtgccttttcccacacagcggtcagagagcatcaggcccgcattgaacagc
cccgtggaaaggccaaacggcgagcaggaggacggagaagcttctgttcagaccgagcgg
gtgccgctggacctcagtcctcggctggaggaggcactggacttcagcgagctggaggcg
gagcccagtgagggggaagacttcgaggcccggggcagccgcttctccaagtctgcggac
gagaggcagcgcatgcttgtgcaacgcaaggatgacctcctgcagcaggcgcggaggcgt
ttcttgaacagaagttctgaagatgactcggcctcggagagctgcctcccctcagaaggg
acgacctctgaccctgtgaccctgcgtcgaaggatgctggccgctgcggccgagcgaaga
cttcagaagcagcagacctcctag
DBGET
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