Cervus canadensis (wapiti): 122420158
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Entry
122420158 CDS
T07554
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122420158 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122420158 (CIC)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122420158 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
122420158
NCBI-ProteinID:
XP_043290875
LinkDB
All DBs
Position
18:complement(15755977..15783315)
Genome browser
AA seq
2509 aa
AA seq
DB search
MKPMKKACTSLPGSGSGGKSPPATRAKALRRRGAGEGDKPEEEDDEAQQQQPGPEEAEEG
EEEEAERGPGAEGLPPELHSDDPAPGPAEEPKVEGEAGRWEPSLSRKTATFKSRAPKKKY
VEEHGAGSGSTGAAGAPEERARTPEEGGALGVPPRPPTSTRSSSTDTASEHSADLEDEPA
EACGLGPWPPGSTSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFHGDRAL
TFYEGVPGGGVDVVLDATPPPGALAVGTAVCTCVEPGVAAYREGVVVEVATKPAAYKVRF
GPGPSSQLGPAALPQPPQPPHREPEEAVWVARSSLRLLRPPWEPEALPRKPPAGPEEEQA
EPGATLPPCPAALDPKQPEDAEVSKISFGGNLGACEEGEEKHPPALGTPALLPLPPQLLS
PPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAPPAARARTPLTAAQQKYKK
GDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADSGPGGA
GRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAVML
VSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRSRHL
SASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLPHPG
ALGAPGAAGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPSPLL
LLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGTGSEARAGGPGRGC
RETPVTPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAFHPSPA
ALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQ
PSEAQQPASHPVASNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGPGPPHTL
GVVDPGKGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSL
SALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKIL
GEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKE
PRERSMSETGTAAAPGVSSELLSVTAQTLLSSDTKTPGSGSCGAERLHAVGGPGSARPRA
FSHSGVHSLDGGEVDSQALQELTQMVSGPTSYAGPKPSTQYGAPGPFAAPGEGGTLAASG
RPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKERVTDS
ESGDSSGEDPEGSKGFGRKVFSPVIRSSFTHCRPSLDPEPPGPPDPPAGFGKGYGPTSSA
SSPAASSSSAATSFPLGSGTFKAQESGQGSTTGPLRPPPAGTGGPATPSKATRFLPTDPA
TFRRKRPESVGGLEPPGPSVIAAPPSGGGGVLQTLVLPSNKEEREGSGARVLSAPAPSLA
YGAPATPLSRPAATMVTNVVRPVSSTPVPIASKPFPAPGRAEASPGDTAGARTEAVTGSR
APGGSPLGVSLVYSDKKSGAATSTAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPAPP
AVQFIAQGGPGSGAAAGSGAGAGSGPNGPMPLGILQPGPLGKAGGITQVQYILPTLPQQL
QVAPAPGTKAAAPGGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKA
QSVSPVQAPPPGGSAQLLPGKVLVPLATPSMSMRGGGAGQPLPLVSPPFSVPVQNGAQPP
SKIIQLTPVPVSTPSGLVPPLSPAPLPGPASQPQKVLLPSSTRITYVQSAGGHAVPLGTS
PASSQPGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQVGVSPVPSPQLP
PTCAAASGPVITAFYPGSPVPTSSAPLAQPSQAPPGLVYTVATSTTPPAAPILPKGPPAP
TAATPAPASPFPSATGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPVGSFEAGAPGRPGP
APRQPLEPGPARDPPASESELEGRPATPAPPLPPETWTPTARSSPPLPPPAEEQTSTKGP
ETMASKFPSSSSDWRVPGLGLESRGEPPTPPSPALAPAPAPGSSSGSSEGGSGRAAGDTP
ERKEAASAGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQSL
ATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTF
ERTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYAD
IFPSKVCLQLKIREVRQKIMQAATPSEQPPGAEAPLPGPPPTGTAAAPVPTPSPAGGPDP
TSPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPSGPSTAATGR
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatgaaaaaggcatgcaccagccttccaggttctggcagcggtggcaagtcc
ccaccagccaccagggccaaggccctgaggcggcgaggggctggggagggggacaagcca
gaggaggaagatgatgaggcgcagcagcaacagccggggcccgaagaggctgaggagggc
gaggaggaggaagccgagcggggcccgggggccgaggggctgcccccggagctgcactcc
gacgacccggccccaggccctgctgaagaacccaaggtggagggggaggcgggccgctgg
gagccttcactcagccgaaagacggccacgttcaagtcacgcgcgcccaagaagaagtat
gtggaggagcacggcgccggcagtggcagcactggggcggcgggtgcccctgaagagcgg
gctcggacccctgaggaaggcggcgctctgggggtgcctccacggccacccacctccacg
cgctcctcctccaccgacacagccagcgagcattcagccgacctggaggatgagccagcc
gaagcctgtggtctgggtccctggccccccggcagcaccagcgggggctatgacttgcgg
cagctgcggtcccagcgagtcttggctcggcgtggggacggcctcttcctgccggctgtg
gtgcgccaggtgcgccgaagccaggacctgggtgtgcagttccacggggaccgggccctg
actttctatgagggggtgcctggcgggggtgtggatgtggttctggatgccacgcccccg
ccgggggctctggcggtgggcacagcggtctgtacctgcgtggagcccggcgtggcggcc
taccgggagggtgtggtggtggaggtggccaccaagcccgctgcctacaaggtccgcttc
ggccctggccccagctcccagctgggcccagccgccctgccgcagccgcctcagccacca
caccgggagcccgaggaggcggtgtgggtggcccgctccagcctccgcctgctgcggccc
ccctgggagcccgaagccctgccaaggaagcccccagcgggccctgaggaggagcaggcc
gagcccggggccacgcttcccccctgccctgctgccctggaccccaagcagcctgaggac
gccgaggtctccaagatcagcttcggtggcaaccttggggcttgtgaggagggtgaggag
aagcacccgcccgccctgggcaccccggctctgctcccactgccgccccagctcctgtca
ccaccgcccaagtccccggccttcgcaggcccaggccgcccgggtgagcagccctccccg
tgccaggaagggagccagggtggcagccggagcagcagcgtggcctcgctggagaagggg
gctccgccggccgcccgggcccgcacgcccctgacggcggcccagcagaagtacaagaag
ggcgacgtggtctgcacgcccaacggaatccgaaagaagttcaacggcaagcagtggcga
cggctgtgctcgagagacggctgcatgaaggagtcccagcggcggggctactgctcccgt
cacctgtccatgcgaaccaaggagatggagggcctggcggacagcggtcctgggggggct
gggcggccggcgggtgtggcggcccgtgagggcagcaccgagttcgactggggggacgag
acgtcgcgggacagcgaggccagcagtgtggcggcccgcggagactcccgtccacgcctg
gtggcccccgccgacctgtctcgctttgagtttgacgagtgtgaagcggcggtgatgctg
gtgtccctgggcagctctcgctcgggcacaccctccttctcccccgtgtctacacagtca
cccttctcgccagccccgtcgccctcaccctcaccgctcttcggcttccgccctgccaac
ttcagccccatcaacgcctcgcccgtcatccagcgcaccgctgtccgcagccgccacctg
agcgccagcacgcctaaggcgggtgtgctgacgccaccagacttgggcccccacccgccg
ccacctgccccccgagagcgccattcctctggcatcctccccaccttccagaccaacctg
acctttactgtgcccatcagtcctgggcgacggaagacagagctgctgccccacccgggg
gcgttgggggcccctggcgcagcgggcggaggagccgccccggacttccccaagagcgac
agcttagactctggcgtggactcggtgtcccacacacctacaccctccacgccggccggc
ttccgagctgtgtcgcccgccgtgcccttctcccgctcccgccagccctcaccgttgctg
ctgttgccgccacctgccggcctgacctcggaccctgggccctccgtgcgccgggtgcct
gccgtgcagcgggactcgcccgtcatcgtccgcaacccggacgtgccgttgccctccaag
ttccccggggaggtgggcactggcagtgaggcccgggccgggggacccgggcggggctgc
cgagagaccccagtgacccccggggtggccagcgggaagcctggcctgcccccacctctg
ccagcccccgtacccatcactgtgcctccagctgcgccgactgccgtggcccagccgatg
cccacctttggcctggcctcctcaccctttcagccggtggccttccacccctcacctgct
gccctgttgcctgtcctggtgcccagcagctataccagccatcctgcccccaaaaaggaa
gtcatcatgggccggcctgggacagtgtggacaaatgtggagcctcgctctgtggccgtg
ttcccctggcactccttagtccccttcctggcccccagccagcctgacccctctgtccag
ccaagtgaggcccagcaacctgccagccaccccgtggcctccaaccagagcaaagaacct
gctgagtcggcggccgttgctcacgagcagccaccgggcgggacagggaatgctgacccg
gggcggccccctggagccacatgccctgagagcccagggcccggacccccccacactttg
ggggtggtggatcctgggaaaggcccccctcccaccacggaggaggaggcccctggaccg
ccaggagagccacggctggacagcgagacagagagtgaccacgacgatgccttcctctcc
atcatgtctcctgagatccagttgcccctgccgcccgggaaacgccggacccagtccctc
agcgccctgcccaaggaacgagactcgtcttcagagaaggatggacgcagccccaacaag
cgggagaaggaccatatccggcggcctatgaatgccttcatgatcttcagcaagcggcac
cgggccctggtccaccagcgccaccccaaccaggacaaccggactgtcagtaagatcctg
ggcgagtggtggtatgccctggggcccaaggagaagcagaagtaccacgacctggccttc
caggtgaaagaggctcactttaaggcccacccagattggaagtggtgcaacaaggaccgg
aagaagtccagctcagaggccaagcccacgagcttggggctggcaggagggcacaaggag
ccgagggagcggagcatgtcggagacaggcactgccgctgcccccggagtgtcttcggag
ctcctgtctgtcacggcccagacactcttgagctcagataccaagactccagggagcggc
tcctgtggggcagagcgtctgcacgctgtcgggggacctggctcggcccggccccgcgcc
ttctcccacagtggggtccacagcctggacggcggagaggtagacagccaggcgttgcag
gaactgactcagatggtgtctggccccacatcctacgctggtccaaagccctccacccag
tatggggctccaggcccctttgcggcgcccggggagggaggcaccctagcagccagtgga
cggcccccactgctccccacccgggcttcccgctcccagcgtgcagccagtgaggacatg
accagtgatgaggaacgcatggtcatctgtgaggaggagggggacgatgatgtcattgct
gatgatggcttcggcaccactgacatcgacctcaagtgcaaggagcgggtgactgacagc
gagagtggagacagttccggggaggacccggagggcagcaagggcttcggccggaaggtg
ttctcacctgtgatccgttcctcctttactcactgccgtccgtcgctggaccctgagcct
ccagggcccccagatccacctgcaggcttcggcaaaggctacgggcccacctcctccgcg
tcctcgcctgctgcctcctcctcctcagccgccacctccttcccattgggctcagggacc
ttcaaggcccaggagtcaggtcagggcagcaccacaggccccctccgtcccccacctgct
ggaactgggggcccagcaacaccttctaaggccacccggtttctccccacggatcctgcc
accttccgtcgcaagagacctgaaagcgtgggcggcctggagccaccgggcccctcagtc
atcgcggcgcctcccagcgggggaggaggcgtcctgcagacactggtcctgccctcaaac
aaggaggagcgggagggcagcggcgcgcgtgtgctctcagccccggcgccctcgctggcc
tacggggccccggcaacccccctgtcccgcccggccgccaccatggtcaccaacgtggtg
cggcccgtcagcagcactcctgtgcccattgcctccaagcctttccctgctcccggccgg
gccgaagcgtctcctggtgacacagctggtgccaggactgaggcggtcactgggtcccgg
gcaccggggggctccccactgggcgtcagcttagtgtattcggacaagaagtcaggagcg
gcaacctctacggccccacacctggtggctgggcccctcctgggcactgtggggaaggcg
ccagccaccgtcaccaacttgctggtgggcaccccaggctacggggccccagcgccacct
gctgtccagttcattgcccaggggggccctggcagtggggcagctgcgggctcgggggcc
ggtgctgggagtggccccaatgggccaatgcccctgggcatcctgcagccgggtcccctg
ggcaaggctgggggcatcacccaggtgcagtacattctgcccacgctgccccagcaactg
caagtggcaccagcccctgggaccaaggcagcggcgcccggcggccctgcccccaccacc
agcatccgtttcaccctcccgccgggcacctccaccaatggcaaagtcctggctgccacc
gcacccactcctggcatccccatcctgcagtccgtgccctccgccccgccccccaaagcc
cagtccgtgtctcctgtgcaggccccgcccccaggtggctcagcccagctgctgcctggg
aaggtactcgtgcccttggccacccccagcatgtccatgcggggaggaggggccggccag
ccgctgccgctggtgagcccgcccttctcagtacctgtgcagaacggcgctcagccaccc
agcaagatcatccagctgactccggtgcctgtgagcacacccagcggcctggtgccgccc
ctcagcccggccccgctccccggccccgcctcgcagcctcagaaggtcctgctgccctcc
tccacgcggatcacctacgtgcagtcagcaggtgggcacgcggtgcccctgggcaccagt
cctgcttccagtcagcctggaacagtcacctcgtatggacccacgagctcggtcgccctc
ggcttcacctcgctggggcccagcggccccgccttcgtgcagcccctgctttcaggccaa
gccccactgctggctcctggccaggtgggcgtgtcacccgtgcccagcccccagctgcct
cccacctgcgcagccgccagtggtcccgtcatcacagcgttttaccccggcagccccgtg
cccacctcctcagcacccctggcccagccatcccaggcccccccaggcctggtctacact
gtggccaccagcaccaccccacctgctgcccccatcctgcccaagggcccaccggcaccc
actgctgccaccccagcccctgccagccctttccctagcgccacaggctccatgacatac
agtttagtggcccccaaggcccagcggcccacccctaaggccccccagaaagtgaaggcg
gccatcgccagcattcccgtgggctccttcgaggctggtgcccctgggaggccaggccct
gcaccccggcaacccttggagcctggcccagcccgtgatcccccagcgtccgagtcagag
cttgaggggcggccagcaacaccagcccctccactgccccccgagacctggactcccaca
gcccggagcagtcccccgctgcccccacctgctgaggagcagaccagcaccaagggccca
gagaccatggccagcaaattccccagctcgtcttcagactggcgtgtccctgggctgggc
ctggagagccgaggggagccccccacccctcccagcccggccctggctccagccccagct
cctggtagcagcagcggcagcagtgagggcggcagtgggagggcggccggggacacccct
gagcgcaaggaggcagctagtgccggcaagaaggtgaaggtgcggcccccgcccctgaag
aagacctttgactctgtggacaacagggtcctgtcggaggtggacttcgaggagcgcttt
gccgagctgcccgagttccggcctgaggaggtgctgccctcgcccaccttgcagtctctg
gccacctcgccccgggccatcctgggctcctaccgcaagaagaggaagaattccactgat
ctggactcggcccccgaggaccccacctcgcccaagcgcaagatgaggaggcgctccagc
tgcagctcggagcccaacacccccaagagtgccaagtgcgagggcgacatcttcaccttt
gaacgcacaggcacagaagctgaggacgtgctcggggagctggagtacgagaaggtgccc
tactcgtcgctgcggcgcaccctggaccagcgccgggccctggtcatgcagctcttccag
gaccacggcttcttcccatcagcccaggccacagcagccttccaggcccgctacgcggac
atcttcccctccaaggtctgtctgcagctgaagatccgtgaggtgcgccagaagatcatg
caggcggccactccctcagaacagcccccaggagccgaggcccccctccccggaccgccc
cctactggcactgctgctgcccctgttcccactcccagccccgcggggggccctgacccc
acctcacctggctcggactctggcacagccccggctgccccgccactgcctccacccccc
gagccggggcctggacagcctggctgggaggggcccccccaaccctcaccacccccctct
ggtccctccacagctgccacaggcaggtga
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integrated database retrieval system
