Cervus canadensis (wapiti): 122420545
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Entry
122420545 CDS
T07554
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03040
Spliceosome
ccad05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122420545
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122420545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122420545
03041 Spliceosome [BR:
ccad03041
]
122420545
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122420545
mRNA cycle factors
Common to processing body (P body) and stress granule
122420545
Spliceosome [BR:
ccad03041
]
Common components
Common spliceosomal components
hnRNP proteins
122420545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
122420545
NCBI-ProteinID:
XP_043291675
LinkDB
All DBs
Position
1:110000620..110002427
Genome browser
AA seq
373 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGGFG
GGSGSNFGGGRSYNDFGSYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGG
SSSSSSYGSGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatcagagtctcccaaagagcccgaacagctgcggaaactcttcatcggagga
ttgagctttgaaacaactgatgagagtctgaggagccattttgagcaatggggaacgctc
acagactgtgtggtaatgagggatccaaacaccaagcgctccagaggcttcgggtttgtc
acatacgccacggtggaggaggtggatgcggccatgaatgcaaggccacacaaggtggac
ggaagagttgtggaaccaaagagggccgtgtcaagagaagattctcaaagacctggtgcc
cacttaactgtgaaaaagatttttgttggtggcattaaagaagacactgaagaacatcac
ctgagagattattttgaacagtatggaaaaattgaagtaattgaaatcatgactgatcga
ggcagtggcaaaaagagaggctttgcttttgtaacctttgatgaccatgactctgtagac
aaaattgtcattcagaaataccacactgtgaatggccacaactgtgaagtgagaaaagcc
ctgtctaagcaagagatggctagtgcttcatccagccagagaggtcgaagtggttctgga
aactttggtggtggtcgtggaggtggttttggtgggaatgacaactttggtcgtggagga
aacttcagtggtcgaggtggctttggtggcagccgtggtggtggcggatatggtggcagt
ggggatggatataatggatttggtaatgacggtggttatggaggaggcggccctggttac
tctggaggaagcagaggctatggaagtggtggacagggttatggaaaccagggcagtggc
tatggcgggagtggcagctatgacagctataacaacggtggaggcggaggcggctttggc
ggtggtagtggaagcaattttggaggtggcagaagctacaatgattttggcagttacaac
aatcaatcttcaaattttggacccatgaaaggaggaaactttggaggcagaagttctggc
ccctatggtggtggaggtcaatactttgccaaaccacgaaaccaaggtggctatggtggt
tccagcagcagcagtagctatggcagtggcagaaggttttaa
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