Cervus canadensis (wapiti): 122420558
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Entry
122420558 CDS
T07554
Symbol
LTBP4
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
122420558 (LTBP4)
Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
122420558 (LTBP4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF
hEGF
EGF_3
Plasmod_Pvs28
EGF_2
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
122420558
NCBI-ProteinID:
XP_043291709
LinkDB
All DBs
Position
18:complement(23123344..23149942)
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AA seq
1621 aa
AA seq
DB search
MRLPGPSGRRPLLLVLLLPLLAAAATAASAAGPSPSQAVEVAAIPGRPAGVLSCRCCPSR
SPRRSRCFRASCRIRSCRPEKCAGPQRCLAPGPPELPSPSPSVRKRQVSLNWQPLTLQEA
RALLRRRRPRGPGARALLRRRPPQRAPAGQSRVLCPLICHNGGVCVKPDRCLCPPDFAGK
FCQLHSSGARPPAPAMPGFTRSVYTMPLANHRDDEHGVASMVSVHVEHPQEASVVVHQVE
RVSGPWEEADAEAVARAEAAARSEAAAPYTVLAQSAPREDGYSDASGFGYCFRELRGGEC
ASPLPGLRTQEVCCRGAGLAWGVHDCQSCSELLGNTRQGGAPDGPCPAGFERVNGSCEDV
DECATAGRCQHGQCANTHGGYTCVCPDGFLLDSSRSSCISQHVISEAKGPCFRVLRDGGC
SLPILRNITKQICCCSRVGKAWGRGCQLCPPFGSEGFREICPAGPGYHYSASDLRYNTRP
LGQEPPRVSLSQPRAPPSTSRPLSGFLPTHRPEPRPEPRPGPELPLPSIPAWTGPEIPES
GPSAGECQRNPQVCGRGRCIPRPSGYTCVCDSGFRLSPQGTHCIDVDECRRVPTPCAPGR
CENTPGSFRCVCGPGFRAGPRGTECLDVDECHRVPPPCDRGRCENTPGSFLCVCPAGYQA
APHGASCQDVDECIQSPGLCGRGVCENLPGSFRCVCPAGFRGSACEEDVDECAQEPPPCG
PGRCDNTVGSFHCACPAGFRSRGPGAPCQDVDECARSPPPCAYGRCENTEGGFQCVCPTG
FQPNAAGSECEDVDECENHLACPGQECVNSPGSFQCRACPAGHQLHHGRCTDVDECSSGA
SCGPHGHCTNTEGSFHCSCEPGYRAPAGRPGPCADVNECLEGDFCFPHGECLNTDGSFAC
TCAPGYRPGPRGASCLDVDECSEEDLCQSGICTNTDGSFECICPPGHRAGPDLASCLDID
ECRERGPALCGSQRCENSPGSYRCVRDCDPGYHAGPEGTCDDIDECQEYGPAICGAQRCE
NTPGSYRCTPACDPGYQPTPGGGCQDVDECRNRSFCGAHAVCQNLPGSFQCLCDQGYEGA
RDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCPNSPEEFDPMTGRCVPPRTSAGTFP
GAQPHAPASPSLPARPPPPPPPRRPSPPRPGPVSSGRRECYFDTAAPDACDNILARNVTW
QECCCTVGEGWGNGCRIQQCPSPETAEYQSLCPHGRGYLAPSGDLSLRRDVDECQLFRDQ
VCKSGVCVNTAPGYSCYCSNGYYYHAQRLECIDNDECADEEPACEGGRCVNTIGSYHCTC
EPPLVLDGSRRRCVSNESQNLDDNLGVCWQEVGADLVCSRPRLDRQATYTECCCLYGEAW
GMDCALCPAQDSDDFEALCNVLRPPAYGPPGPGGFGLPYEYGPDLGPPYQGLPYGPELYP
PPVLPYDPYPPPPGPFARREAPYGTPPFDMPDFEDDGGPYGESEAPAPSGPGTRWRYRSR
DTRGSFPEPEESPEGGSYAGAQAGRYEGLEAEECGILDGCAHGRCVRVPEGFTCDCFDGY
RLDMTRMSCVDINECDEAQAAAPRCVNARCVNTDGSFRCICRPGFAPSHEPHHCTPARPR
A
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcctggccccagcggccgccgccccctcctgctggtgctgctgctgccgctc
cttgcagccgccgccaccgccgcctccgccgccggccccagccccagccaggccgtcgag
gtcgcggcgatcccgggccgtccggccggtgttctttcttgtcgctgctgcccaagccga
tcgcccagaaggagccgctgctttagagcctcctgcaggatccggagctgccggcccgaa
aagtgtgcaggccctcagcggtgcctggctccagggcccccagagctgccgagccccagc
cccagcgtgaggaagagacaggtgtcccttaactggcagccactgacgctgcaggaggcc
cgagccctgctgaggcgacggcggccccgcgggccgggggcccgggcattgctgagaagg
aggcccccacagcgcgcccctgccggccagtcccgggtcctgtgtcccttgatctgtcac
aatggaggagtgtgcgtgaagcctgatcgctgcctctgtcccccggacttcgctggcaag
ttctgccaattgcattcatcgggcgcccgacccccggccccggccatgccaggcttcacc
cggtctgtgtacaccatgccgctggccaaccaccgcgatgatgaacatggcgtggcgtct
atggtgagcgtccacgtggagcacccgcaggaggcgtcggtggtggtgcaccaggtggag
cgtgtgtccggcccttgggaggaggcggacgccgaggcagtggcgcgagcggaggcggcg
gcacgatcggaggcggcagcgccctacacagtgttggcacagagcgcgccgcgcgaggac
ggctactcggacgcttcgggcttcggttactgctttcgggagctgcgcggaggcgaatgt
gcgtccccgctgcccgggctccggacgcaggaggtgtgctgccgaggggccggcttggcc
tggggcgttcacgactgtcagtcttgctcggagctcctgggtaacacccgccaggggggc
gccccagatgggccgtgtccagctggttttgaaagggttaatgggtcctgcgaagatgtg
gatgagtgcgcgactgcggggcgctgccagcacggacagtgtgcgaacacgcatggcggg
tacacttgcgtttgccccgacggctttctgcttgactcgtcccgcagcagctgcatctcc
caacacgtgatctcagaggctaaggggccgtgcttccgcgtgcttcgagacggcggctgc
tctctgcccattctacgcaacatcaccaaacagatctgctgctgcagccgtgtaggcaaa
gcctggggccggggttgccagctctgcccacccttcggctcagagggttttcgggagatc
tgcccagccggccctggctaccattactcggcctccgacctccgctacaacaccagaccc
ctgggccaggaaccaccccgagtgtccctcagccaaccccgtgccccaccctccacctct
cgaccactctcaggctttctgcccactcatcgcccagaacctcggcctgagccccgtcca
ggccctgagcttcctctgcccagcatccctgcctggactggtcctgagatccctgaatca
ggtccctctgcaggcgagtgtcagcgcaatccccaggtctgcggccgcggacggtgcatc
ccccggcccagtggctacacctgcgtgtgcgactccggtttccgactcagtccgcagggc
acacactgcatcgacgtggacgaatgtcgccgcgttcccacgccttgtgctcccgggcgc
tgcgaaaacacgccaggcagcttccgttgcgtatgcgggccgggcttccgagccggcccg
cggggtacggagtgtttggacgtggacgagtgccaccgcgtgccgccaccgtgtgaccgt
gggcgctgcgagaacacgcctggcagcttcctgtgcgtgtgccccgcggggtaccaggct
gcgccccacggagccagctgccaggatgtagatgaatgtatccagagcccgggcctgtgt
ggccgaggggtctgtgagaacctgcctggctctttccggtgtgtgtgccctgctggcttc
cgaggctcggcatgtgaagaagacgtggatgagtgtgcccaggagccaccgccctgtggg
ccgggccgctgtgacaacacagtgggctcttttcactgtgcctgccctgctggcttccgc
tcccgagggcctggggccccctgccaagatgtggacgagtgtgcccgtagtcccccgccc
tgcgcctatggccgatgtgagaacacggaaggtggcttccagtgcgtctgccccacaggc
ttccaacccaatgctgccggctccgagtgcgaggatgtggacgagtgtgagaaccacctg
gcgtgtcctgggcaggagtgtgtgaactcaccaggatccttccagtgcagggcctgtcct
gctggtcaccaactgcaccatggccgatgtactgatgtggacgaatgcagttcgggtgcc
tcctgcggcccccatggacattgcactaacaccgaaggctccttccactgcagctgcgag
ccaggctaccgggcgccagctggtcggcccgggccctgcgcagacgtgaacgagtgcctg
gagggcgacttttgcttcccccacggtgaatgcctcaacaccgacggctccttcgcttgt
acttgtgcccccggctaccggcccggaccccgcggagcctcttgcctcgacgtggacgaa
tgcagcgaggaggacctctgccagagcggcatctgtaccaacaccgacggctctttcgag
tgcatctgtcctccgggacaccgcgccggcccagacctcgcctcctgtctcgatattgac
gaatgtcgggagcgcggcccggccttgtgcgggtcccagcgttgtgaaaattccccgggc
tcctaccgctgtgtccgagactgcgaccccggctaccacgcaggccccgagggtacctgt
gacgacatagatgagtgccaggaatacggcccagcgatttgtggagcccagcgctgtgag
aatacccctggctcctaccgctgcacgcccgcctgtgaccctggctaccagcccacgcca
gggggcggatgccaggatgtggacgaatgccggaaccggtccttctgtggggcccacgcc
gtgtgccagaacctgcctggctccttccagtgcctctgtgaccagggctacgagggggcg
cgggacgggcgtcactgcgtggatgtgaatgaatgtgagacactacagggcgtgtgtgga
gctgccctgtgtgagaatgtggaaggctccttcctctgtgtctgccccaacagccctgag
gagtttgaccctatgactgggcgctgtgttccccctcggacctctgctggtacgttccca
ggcgcacagccccatgcacctgccagccccagtctgccggccaggcccccacccccgccc
ccgcctcgccggcccagcccacctaggccgggccctgtgagcagcgggcgcagggagtgc
tactttgacacggcggctccggatgcctgtgacaacatcctggctcggaacgtgacgtgg
caggagtgctgctgcactgtgggtgagggctggggcaacggctgccgcatccagcagtgc
ccgagccccgagacagctgagtaccagtcattgtgcccccatggccggggctacctggcg
cccagcggagatctgagcctcaggagagacgtggacgagtgccagctcttccgagatcag
gtgtgcaagagcggcgtgtgcgtgaacacagccccaggctactcgtgttattgcagcaat
ggctactactatcacgcccagcgactggagtgcatcgataatgacgagtgcgcggacgag
gagccagcttgtgagggcggccgctgcgtcaacactatcggctcttatcactgcacgtgc
gaacccccacttgtgctggacggctcgcggcgccgctgcgtctccaacgagagccagaac
ctcgatgacaatctgggagtgtgctggcaggaagtgggggctgacctcgtgtgcagtcgc
cctcggctggaccgccaggccacctacacagaatgctgctgcctctatggcgaagcctgg
ggcatggactgtgccctctgcccggcccaggactcagatgactttgaggccctgtgcaac
gtgctgcgcccccctgcatatggacccccggggccaggtggctttggactcccctacgag
tatggcccagacctaggtccaccttaccagggccttccctatgggcctgagttgtaccca
ccacccgtcctaccctatgacccctacccaccgccacctgggcccttcgcccgacgggag
gccccttacgggacgccacccttcgacatgccggactttgaggacgatggtggcccctac
ggtgaatccgaggctcctgctccatccggcccgggcacccgctggcgctaccggtcccgt
gacacccgtggctccttcccagagcccgaggagtcgcctgaaggtggaagctatgctggc
gcccaggctgggcgctacgagggcctggaggcagaggagtgcgggatcctggatggctgc
gcccacggccgctgcgtgcgcgtccccgagggcttcacctgcgactgcttcgacggctac
cgcctggacatgactcgcatgtcctgcgttgacatcaacgaatgtgacgaggcccaggcg
gccgccccgcgctgtgtcaacgcgcgctgcgtcaacaccgatggctcgttccgctgtatc
tgccgcccaggattcgcaccctcacacgagccgcatcactgcacgcccgccagaccccgg
gcctga
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