Cervus canadensis (wapiti): 122420786
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Entry
122420786 CDS
T07554
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122420786 (CTCF)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122420786 (CTCF)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122420786 (CTCF)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122420786 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
122420786
NCBI-ProteinID:
XP_043292198
LinkDB
All DBs
Position
18:complement(37271872..37314936)
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDSCHLPQNQTDGGEVVQDVNNSVQM
VMMEQLDPTLLQMKTEVMEGAVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPVICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEETQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gagagaaaaacttaccagagacgccgggaagggggccaggaagaggactcttgccacctt
ccccagaaccagactgatggtggtgaggtggtccaggatgtcaataacagtgtacagatg
gtgatgatggaacagctggatcctacccttcttcagatgaagactgaagtcatggagggt
gcagtcgctccagaagcagaggctgccgtggacgatacccagattataaccttgcaggtt
gtaaatatggaggaacagcctataaacataggagagcttcaacttgtgcaagtacctgtt
cctgtgactgtacctgttgctaccacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttgcagaaagtgaacccgtgatatgtcacaccttacctttg
cctgaagggtttcaagtggtaaaagtgggggccaatggagaggtggagaccctggagcaa
ggggaacttccgcctcaggaagatcctagttggcaaaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtgtatgattttgaggaagagcagcaggagggtctgctgtcagaggtt
aatgcagagaaagtggttggtaacatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacatgtccacggcgttcaaat
ttggatcggcatatgaaaagtcacactgatgagagaccacataagtgccatctctgtggc
agggcattcagaacagtcacccttctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgtgatatggcctttgtgactagtggagaattggtgcggcat
cgtcgttacaaacacacccatgagaagccatttaagtgttccatgtgcgattacgccagt
gtagaagtcagcaaattaaagcgtcacattcgctctcacactggggagcgtcctttccag
tgcagcttgtgcagttatgccagcagggacacatacaagctgaaaaggcacatgcggacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgcacggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatctgggtgtccacttgcgaaagcagcat
tcctacattgagcagggcaagaaatgccgatactgcgatgctgtgtttcatgagcgctat
gccctcatccagcaccagaagtcacacaagaacgagaagcgctttaagtgtgatcagtgt
gattatgcttgtagacaggagaggcacatgatcatgcacaagcgcacccacactggggag
aagccttatgcctgcagccactgcgacaagaccttccgccagaaacagctcctcgacatg
cacttcaaacgctatcatgacccgaactttgtccctgcggcctttgtctgttctaagtgt
gggaaaacatttacacgccggaatactatggcaagacatgcggataattgtgctggtcca
gatggtgtagaaggggaaaatggaggagaaacgaagaagagtaaacgtggaagaaagaga
aagatgcgttctaaaaaggaagactcctctgacagtgaaaatgctgagccagacttggat
gacaatgaggatgaggaggagcctgccgtggagattgaacccgagccagagccccagcca
gtgaccccagccccaccacctgccaagaaacggagaggacgcccccctggcagaaccaac
cagcccaaacagacccagccaacagccatcattcaggtcgaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagacgcagagcctgcggagggggag
gaagaggagacccagccagctgccacagatgcccccaacggagacctcacgcctgagatg
atcctcagcatgatggaccggtga
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