Cervus canadensis (wapiti): 122420803
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Entry
122420803 CDS
T07554
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
122420803 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
122420803
NCBI-ProteinID:
XP_043292231
LinkDB
All DBs
Position
18:complement(21697691..21748584)
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AA seq
2177 aa
AA seq
DB search
MTHSPASSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGRGSGAAGSLASIRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGTGLTVPPALLRANSDTSMALPDWMVFAAPGTSSTGAPGPTSGPQGQAQPTAPSAK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPRDGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKGRI
GWFPSDCLEEVANRSQEAKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
TISLRSKSMTSELEEMVSPWKKKSEYEQPPPPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPGPGGLASLGKHRPKGFFTTESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGG
PFNPSSGGTHPASSPASFDGPAPPDTRIGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPA
PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGALSPSHHGSGGG
AGGPSQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVVEGEPQKGGGLPPAPS
PTSPASPQPPPPPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPSQPEA
AGGGGGSSAPSPAPAVSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQN
EARRRSTLFLSTDAGDEDGGDSSLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGASS
GSGYAGYAAGGRAYGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSE
GGGPPQPPPRPPSPRYEAPPPTPLHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQ
EKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPAPHPGVSKPWRSGAPPEEPERL
PLHVRFLENCQPRAGGAGGRGPPSEDGPGVPPPSPRRSAPPSPTSPRGSEENGLPLLVLP
PPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLPPVPPP
AVAAAPPTLDSTASSLTSYDSEVATLTQGAPAAPGDPPPPGPPAPAAPAPPAPQPGPDPP
PGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGAGAGTGGVGGSGGASVAGGPEL
LDTYVAYLDGQAFGGSGTPGPPYPPQLMTPSKLRGRALGAGGGLRPGPGGGLRDPVTPTS
PTVSVTGAGTDGLLALSGCPGSSTAGVAGGPVAVEPEGPPVPLPSASSLPRKLLPWEEGP
GPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDS
HHGGASYVPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWSKPPLPPLPTGTAVSPSAAA
APGATSPSASSSSTSARHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILP
SGPLYPGLFDMRGSPTGGAGGSADPFAPVFVAPHPGMSGGLGGALSGASRSLSPTRLLSL
PPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVTR
VGHRMNIDRALKFFLER
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccgggagaggcccccgggggacc
cggggccggggcagcggtgcagctggtagcctggcctccatccgaggcctccagggccgc
tccatgtccgtcccagacgacgcccacttcagcatgatggtttttaggatcggcatccct
gaccttcaccagacaaaatgcctgcgcttcaacccggatgccaccatctggaccgccaag
cagcaggtgctctgcgccctgagcgagagcctccaggacgtgctcaactatggcctgttc
cagccagccacctcgggccgggacgccaacttcctggaggaagagcggctgctgcgggaa
tacccccagtccttcgagaagggggtgccctacctggagttccgatacaagacccgtgtt
tacaagcagaccaacctggatgagaagcagctggccaagttgcacacgaagacggggttg
aagaagttcctggagtacgtgcagctcgggacatccgataaggtggcacggctgctggac
aaggggctggaccccaattatcacgactcggattcaggagagacccccctgacactggct
gcccagaccgaaggctccgtagaggtgattcgaaccctgtgcctgggcggggcgcacatc
gacttccgggcccgggatggcatgaccgcgctacacaaggctgcctgtgcccgccactgc
ctcgctctgacggcgctcctggatcttgggggctcccccaactacaaggaccgccgaggg
ctgactcccctgttccacacggctatggtggggggtgacccccgctgctgcgagctgctc
ctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggagattcaccag
gcctgccagcggggtcattctcagcatctggaacatctgcttttctatggagctgagcct
ggagcccagaacgcctcggggaacacagccctgcacatctgtgcgctctacaataaggag
acgtgtgctaggatccttctctatcgaggggccaataaggatgtcaagaataacagtgga
cagacccccttccaggtggcagtaatcgctgggaattttgaacttggggagctgatccga
aaccatcgagaacaggacgtggtgcccttccaggagtcccccaagtacgcagcccggcgc
cggggacccccaggcacagggctgacagtgccccccgcgctgctgcgggccaacagtgat
accagcatggccctgcccgattggatggtgttcgccgccccggggacctcgtccacgggg
gcccccggccccacctcagggccccagggccaggcgcagcccaccgcccccagcgccaag
ctcagcagcgggaccctgcggagtgccagcagcccccggggcgcccgggcccgctccccg
tcccgcgggaggcaccccgaggaggccaagcgtcagcctcgtggacggcccagctccagc
gggacaccccgggacgggccggccgggggcacggggggctccgggggccccgggggctcc
ctgggcagccgcgggagacgcaggaagctctactcggccgtccctggacgctccttcatg
gccgtgaagtcctaccaggcccaaggcgagggggagatctccctgagcaagggcgaaaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcatt
ggctggttcccctctgactgcctggaagaggtggccaaccgctcccaggaagcaaagcaa
gaaagccgaagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcatcaaa
gagaagacagttctgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccagccttcccggcactgcag
tatctggagtcggtggacgagggcggcgtggcatggcgggctggactgcgaatgggagac
ttcctcatcgaggtgaatgggcagaacgtggtgaaggtcggccaccggcaggtggtgaac
atgatccgccaagggggcaacacgctgatggtcaaggtggtcatggtcaccaggcatccg
gacatggatgaagctgttcataagaaagcgccccagcaagctaagcggctcccgccccca
accatctccttgcgttccaagtctatgacctcggagctggaggagatggtctccccctgg
aagaagaagagtgagtacgagcagccgccgccgccggtgcccagcatggagaaaaagcgg
accgtgtatcagatggctctcaacaaactggatgaaatcttggcggcagctcagcagacc
atcagtgcaagcgagagtcctgggcccggtggcctggcttccctgggcaaacaccgaccc
aaaggcttctttaccactgagtcaagctttgatccccaccaccgctcccagccaagttac
gaacgtccttcctacctgcctcctggacctgggctcatgctccggcaaaaatctattggg
gctgcagaagacgatagaccctacctagcacccccagccatgaagttcagccgcagtctg
tctgtgcctggttcggaggacatccccccgccgcccaccacgtccccaccagagcccccc
tacagcacacctccagccccgtcctcctccggccgcctcactccctctccccggggtggg
cccttcaaccccagctcaggtggcacccacccggcctcatccccggcgtccttcgatggg
cccgccccgcctgacactcggatagggagccgagagaagagcttgtatcacagcgggccc
ctgcccccagcccatcaccacccgccccaccatcaccaccaccacgccccgccccccgcg
ccccaccaccaccacgcccacccgcctcaccccccggagatggagaccggcggctccccc
gacgaccccccaccccgcctggctctggggccccagcccagtctgcgaggctggcggggc
ggcgggcccagcccgaccccgggggcgctgtccccgtcgcaccacggcagcgggggcggc
gcgggcggcccctcccaggccccggcgctgcgctacttccagctgcctcctcgggcggcc
agcgcggccatgtacgtgcccgcccgttccggccgcgggcgcaagggcccgctcgtcaag
cagaccaaagtcgtcgaaggcgagccccagaagggcggcggcctcccgcccgccccctcg
cccacgtctccggcgtccccgcagccgccgccgccgccgccgccggccgcggccgccccg
tcggaaaagaactccatccccatccccaccatcatcatcaaggcgccatccaccagtagc
agcggccgcagcagccaggggagcagcaccgaggcggagcccccgagccagcccgaggcc
gcgggcggcggcggcggctcttccgcgcccagccccgccccggccgtgtcgcccgtgccg
ccgtccccctcgcccgtgcccacccccgcctcgcccagtggcccggccaccctggatttc
accagccagttcggagcggccctggtgggggcagctcggagggaagggggctggcagaac
gaagcccgccggcggtccacgctcttcctctccaccgacgcgggcgacgaggacggcggc
gacagctcgctgggcccaggggcgcccccgggcccccggctgcgccactccaagtccatc
gacgaaggcatgttttcggccgagccctacctccggctggagtcggcgggcgccagcagc
ggcagcggctacgcgggctacgcggccgggggccgagcctacgggggcagcagcgccttt
accagcttcctgccgccgcgacccctggtccacccgctgaccggcaaggccctggacccg
gcctccccactcgggctggccctggccgcccgggagcgggcgctgaaggagtcctcggag
ggcggtgggcccccccagccccctccaaggcccccatcgccccgctacgaggccccgccg
cccactccgctccaccactcgccccacgcccaccacgagccagtgctgcgcctctgggga
gcctcgcccccggacccggcccgccgggagctggggtaccgggcagggctgggcagccag
gagaagtcccttccggccagccctccggcggcccgacgctccttgctgcaccgcctgcct
cccacagctcccggggtcgggcccctcctactgcagctggggcccgagcccccagccccg
caccccggggtgagcaagccctggagatccggcgcccccccggaggagcccgagcggctg
cccctccacgtgcggttcctggagaactgccagccccgggccggaggggcgggtggaagg
gggcccccctcggaggacgggccgggggtcccgccgcccagtccgcgccgctcggcgccg
ccctcgccgacctccccgcggggcagtgaagagaacgggctccccctgctggtcctgccg
ccgcccgccccctcggtggacgtggaagacggcgaattcctctttgtggaaccgctgccc
ccgcccctcgagttttccaacagcttcgagaagccggagtcgcccctcacgcccgggcct
ccccacccgctgccggacccacccaccccgaccacccccttgccccctgtgccgcccccg
gccgtggccgccgcccctcccaccctggactcgaccgcatccagcctgacttcctatgac
agcgaggtggcaacgctgacccagggggcccccgcggctcccggggacccccctccgcca
ggccctcccgccccagccgccccggctcccccagctccccaacctggcccagaccctccg
ccgggcacggattctggtattgaggaggtggacagtcggagcagcagcgaccaccccctg
gagaccatcagcagcgcctccacgctgagcagcctgtccgctgaaggcggcggcgcaggg
gctggaaccgggggcgttggaggcagtggcggtgccagcgtggccggtgggccggagctc
ctggacacctacgtggcatacttggacggccaggccttcgggggcagcggcactcctggc
cccccataccccccgcagctcatgactccctctaagctccggggccgggcgcttggggcc
ggaggaggcctgcggccgggccccggtgggggactccgagaccctgtcactcccaccagc
cccactgtctcggtgacgggggcgggaacggatgggctgctggccctgagcggttgtccg
ggatcctcgacggcaggcgtggctggcggccccgtggctgtagagccggaaggtccgcca
gtgcccttgccgtcggcctcctccctgcctcggaagctgctgccctgggaggagggcccg
ggcccgccgccgcccccgctgccggggcccttagcccagcctcaggcctcagccttggcg
actgtaaaagccagcatcatcagtgaactcagctccaagcttcaacagtttgggggctcc
tcggcagctggtggcgctctgccctgggcccggggaggcagcgggggaagcggggacagc
caccacgggggagccagctacgtcccggagcggacttcctccctgcagcggcagagactc
tccgaagactcccagtcctcgctcctctccaaacctgtgagcagcctgtttcagaactgg
tccaaaccacctctgccgccactccccacgggaaccgcggtgtccccttcagccgctgca
gccccgggggccacctccccatcggcttcctcctcctccacgtccgcccgccacctccag
ggcgtggagttcgagatgcgcccacctttgctccgccgggcccccagcccctcactgctg
cccgcctcggagcacaaggtcagccctgcgccccggccctcgtccctccccatcctgcct
tccggacccctctacccgggcctctttgacatgcgcggctcccccaccggaggggcagga
ggctcggccgaccccttcgcccccgtctttgtggcgccccaccccgggatgtccgggggt
ctcggcggggccttgtcaggggcctcccgctccctttcaccgacccgcctgctttccctg
cccccggacaagccgttcggcgctaaacctctgggcttctggaccaagttcgatgtggct
gactggctagagtggctgggcttggccgaacaccgagcccggttcctggaccacgagatc
gatggctcccacctgcccgccttgaccaaggaggactacgtcgatttgggggtgaccagg
gtgggacaccgcatgaacatcgaccgggctctcaagtttttcctggagaggtga
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