KEGG   Cervus canadensis (wapiti): 122420992
Entry
122420992         CDS       T07554                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122420992 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccad03041]
    122420992 (SF3A1)
Spliceosome [BR:ccad03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122420992 (SF3A1)
 Complex B
    122420992 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    122420992 (SF3A1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 122420992
NCBI-ProteinID: XP_043292606
LinkDB
Position
1:110971751..110990241
AA seq 793 aa
MPAGPVQAVPPPPPAATEPKQPTEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQAAQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAV
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcccccgccgccgcccgcggccaccgagcccaaa
cagcccacagaagaagaagcatcttcaaaggaggattctaccccttccaagccagtggtg
ggtattatttaccctcctccggaggtcagaaacatcgttgacaagactgccagcttcgtg
gccagaaatggacctgaatttgaagcgaggatacgacagaacgagatcaacaaccccaag
ttcaacttcctgaaccccaacgacccttatcatgcctactaccgccacaaggtcagcgag
ttcaaggagggcaaggcccaggagccctcggccgccatccccaaggtcatgcagcagcag
cagcaggccgcccagcagcagctgccccagaaggttcaagcccaggtgatacaagagacc
attgtgcccaaagagccccctcccgagtttgagttcatcgcagaccccccttccatctca
gccttcgacctggacgtggtgaagctgacggctcagtttgtggccaggaatgggcgccag
tttctgacccagctgatgcagaaagagcagcgcaactaccagtttgacttcctccgcccg
cagcacagcctcttcaactacttcacaaagctggtggagcagtacaccaagatcttgatt
ccacccaaaggtttatttaccaagcttaagaaagaggcagagaacccccgggaagtgttg
gaccaggtgtgttaccgcgtagaatgggccaagttccaggagcgtgagaggaagaaggaa
gaggaggagaaggagaaggagcgggtcgcctacgctcagatcgactggcatgacttcgtg
gtggtggaaacagtggacttccaacccaacgagcaagggaacttccccccacctaccacc
ccggaggagctgggggcccggatcctcattcaggagcgctacgagaagtttggggagagc
gaggaggtcgagatggaggttgagtccgatgaggaggatgagaaacaggagaaggcagag
gagcctccgtcccagctggaccaggacacccaagtgcaagacatggacgagggttcggat
gatgaagaagaagggcagaaagtgcccccacctccggagacacccatgccacctcctctg
cccccaactccagaccaggtcattgtccggaaggactatgacccaaaggcttccaagccc
ctgcctccagcccccgctcctgatgagtatcttgtgtcccccatcactggggagaagatc
cctgccagcaagatgcaggagcacatgcgcattgggcttctcgacccccgttggctggag
cagcgggatcgctccatccgtgagaagcagagcgatgacgaggtgtacgcgccaggtctg
gatatcgagagcagcttgaagcagctggctgagcggcgtactgacatctttggtgtggag
gaaacggccatcggtaagaagattggcgaggaggagatccagaaaccggaagagaaggtg
acctgggacggccactctggcagcatggcccggacccagcaggccgcccaggccaacatc
accctccaggagcagattgaggccatccacaaggcgaagggcctggtgccggaggatgac
accaaagagaagatcggcccgagcaagcccaacgagatcccccagcagccgccgccaccg
tcctcagccaccaacatccccagctcggccccgcccattacatccgtgccccggccgccc
gcgatgccgcctcccgtccgtaccacggtcgtgtccgcagtacccgtcatgccccggccc
ccaatggcgtccgtggtccggctgcccccaggctcggtgattgcccctatgccgccaatc
atccacgcgcccaggatcaacgtggtccccatgcctccctcagcccctcccatcatggcg
cctcgcccaccacccatgattgtgccgacagcttttgtgcccgccccacccgtggcaccc
gtccccgctccagcccccatgccgcctgtccaccccccgcctcccatggaagacgagcct
acctctaagaaactgaagaccgaggacagcctcatgcccgaggaggagtttctgcgcaga
aataagggtccagtgtccatcaaagtccaggtgcccaacatgcaggataagacggaatgg
aaactgaatggccaggtgctggtcttcaccctccccctcacagaccaggtctctgtcatc
aaggtgaagattcacgaagccacaggcatgccagcagggaaacagaagttgcagtacgag
ggcattttcatcaaggattccaactcgctggcttactacaacatggccaatggtgccgtc
atccacctggcactcaaggagagaggcggaaggaagaagtag

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