Cervus canadensis (wapiti): 122421081
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Entry
122421081 CDS
T07554
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03022
Basal transcription factors
ccad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122421081 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
122421081 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122421081 (ERCC2)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122421081 (ERCC2)
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122421081 (ERCC2)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122421081 (ERCC2)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122421081 (ERCC2)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122421081 (ERCC2)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122421081 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
122421081
NCBI-ProteinID:
XP_043292806
LinkDB
All DBs
Position
18:complement(17892443..17907788)
Genome browser
AA seq
773 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQRDSSLPHCRFYEEFDVHGRQVPLPTGIYNLDDL
KAVGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQANLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEISDLTDFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKCEEGPWPPSLHPQARLEYLRDQFQIR
ENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLN
LTVDEGVQVAKYFLRQMAQPFHREDQLGLSLLSLEQLESEETLRRIEQIAQQL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccttacgactacatctacccggag
cagttctcgtacatgctggagctcaaacgcacgctggatgccaagggtcatggagtcctg
gaaatgccctcaggcactgggaagacagtgtctctgttggccctgatcatggcataccag
cgggcgtatcccctggaggtgactaaactcatctactgctcgaggactgtgcctgagatt
gagaaggtgattgaagagcttcgaaagttactcagcttctatgagaaacaggagggtgag
aagttgccgtttttggggctggctctgagctcccggaagaacctgtgcattcatcccgag
gtgacgcccctgcgctttgggaaggacgtggacgggaaatgccacagcctcacggcctcc
tacgtgcgggcgcagtaccagcgggactccagcctgccccactgccgcttctacgaggag
tttgatgtccacgggcgccaggtgccgctcccgacgggcatctacaacctggacgacctg
aaggccgtggggcggcgccagggctggtgcccgtacttcctggcccgatactcgatcctg
cacgccaacgtggtggtctacagctaccactacctgctggaccccaagattgccgacctg
gtgtccaaggagctggcccgcaaggctgtggtcgtctttgacgaggcccacaacatcgac
aacgtctgcatcgactccatgagcgtcaacctcacccgccgcaccctggatcggtgccag
gccaacctggagaccctgcagaagacagtgctcaggatcaaggagacggacgagcagcgg
ctgcgggaggagtaccgccgcctggtggaggggctgcgggaggccagcgccgcccgggag
accgatgcccacctggccaaccccgtgctgcccgacgaagtgctgcaggaggcggtgccc
ggctccatccgcacggccgagcacttcctgggcttcctgcgccgcctgctggagtacgtc
aagtggcgcctgcgggtgcagcacgtggtccaggagagcccgcccgccttcctcagcggc
ctggcccagcgcgtgtgcatccagcgcaagcccctcaggttctgcgccgagcgcctccgc
tcccttctgcacaccttggagatctcagacctcactgacttctccccactcaccctcctc
gctaacttcgccacgctcgtcagcacctacgccaagggtttcaccatcatcatcgagccc
ttcgacgacaggaccccgaccattgccaaccccatcctgcacttcagctgcatggatgcc
tcgctggccatcaaacctgtgttcgagcgcttccagtcagttatcatcacatccgggaca
ctgtccccgctggacatctaccccaagatcctggacttccatcccgtcaccatggcaacc
ttcaccatgacgttggcccgggtctgcctctgccccatgatcatcggccgtggcaatgac
caggtggccatcagctccaagtttgagacccgggaagatattgcggtgatccggaactac
ggaaacctcctgctggagatgtccgccgtggtccctgatggcatcgtggccttcttcacc
agctaccagtacatggagagcaccgtggcctcctggtacgagcagggcatcctggagaac
atccagaggaacaagctgctcttcatcgagacccaggatggggctgagaccagcgtcgcc
ctggagaagtaccaggaggcctgcgagaacggccgcggggccatcctgctctcggtggcc
cgaggcaaggtgtcggagggaatcgactttgtgcaccactatgggcgggccgtcatcatg
tttggggtgccctacgtctacactcagagccgcattctcaagtgtgaggaagggccctgg
cccccatctctgcacccacaggcacggctggaataccttcgggaccagttccagattcgt
gagaatgactttctcacctttgacgccatgcgccacgccgcccagtgtgtgggtcgggcc
atcaggggcaagacggactatggcttgatggtctttgccgacaagcggtttgctcgggct
gacaagcgggggaagctgccccggtggatccaggagcacctcacggatgccaacctcaac
ctgaccgtcgacgagggggtccaagtcgccaagtacttcctgaggcagatggcacagccc
ttccaccgggaggaccagctgggcctgtccctgctcagcctggagcagctggagtcagag
gagacgctgcggaggattgagcagattgcccagcagctgtag
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