KEGG   Cervus canadensis (wapiti): 122421126
Entry
122421126         CDS       T07554                                 
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122421126 (EXOSC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccad03019]
    122421126 (EXOSC6)
Messenger RNA biogenesis [BR:ccad03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     122421126 (EXOSC6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 122421126
NCBI-ProteinID: XP_043292862
LinkDB
Position
18:complement(63006492..63007820)
AA seq 272 aa
MPGDHRRIRGPEESQPPQLYATGEGEAPAPRDPARLRPVYARAGLLSQAKGSAYLEAGGT
KVLCAVSGPRPAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFSGRRRRAPPGGGEER
ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV
VGCGLSRAPAPAPTWLLDPTLLEEERAAAGLTVALMPVLNQVAGLLGSGEGGPTESWAEA
VRLGLEGCQRLYPVLQQCLVRAARRRGAAAPL
NT seq 819 nt   +upstreamnt  +downstreamnt
atgcccggggaccaccgccgcatccgcgggcccgaggagtcgcagccgccgcagctgtac
gcgaccggcgagggcgaggcgccggcccctcgcgacccggcgcggctgcggccggtgtac
gcgcgcgccgggctgctgagccaggccaagggttcggcctacttggaggcgggcggcacc
aaggtgctgtgcgccgtgtcgggcccgcgccccgccgagggcggcgagcgcggcggcggc
ccggccggggcgggcggcgaagcccccgcggcgctgcgcggccgcctgctctgcgacttc
cgccgcgcgcccttctcgggccgccggcgccgcgccccgcctggcggcggcgaggaacgc
gagctggcgctggcgctgcaggaggcgctcgagccggccgtgcgcctcggtcgctacccg
cgcgcgcagctcgaggtgtcggcgctgctgctggaggacggcggctcggcgctggccgcc
gcgctcacggccgccgcgctcgccctggccgacgcgggcgtcgagatgtacgacctggtg
gtgggctgcggcctgagccgcgcgccggcgcccgcgcccacctggctgctggaccccacg
ctgctggaggaggagcgcgccgccgccggcctcaccgtggcgctcatgccggtgctcaac
caggtggccgggctgctgggcagcggggagggcggcccgaccgagagctgggcggaggcc
gtgcgcctggggctcgagggctgccagcgcctctaccccgttctccagcagtgcttggtg
cgggccgcccgccggaggggtgcagccgcgcccctctga

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