KEGG   Cervus canadensis (wapiti): 122421132
Entry
122421132         CDS       T07554                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122421132 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccad03400]
    122421132 (XRCC1)
DNA repair and recombination proteins [BR:ccad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     122421132 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 122421132
NCBI-ProteinID: XP_043292872
LinkDB
Position
18:complement(16531008..16551704)
AA seq 657 aa
MPEIRLRHVVSCSSQDSTYCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGTGEQDYEVLLVTSSFMSPAESRSGSNSNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDAPYGLSFVRFHSPPDKDEAEVSSQKVTKLGQFRVKEEDENA
SSLKPGALFFSRINKTPPVAASDPAGPSYAAATLQASSAAASASPVSRAVGSTFKVRSSD
PGGAEKEEKSWRPQHNPPPQPQESPKGKRKLDLNQEEKKTPSKPSAQPSLPALKRPKLPA
PARTPATPPTPAPARGPAPGKPRGDGAEPRAPRAGPQELGKILQGVVVVLSGFQNPFRSE
LRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLP
SRRYLMAGSGSSSEDEGGSHSGGSGDEAPKAPRKRPQTKAKPPQAAGPSSPQRPPTPEET
KPASPGAQEDNDDTEAEQAEGQDNGAEDSGDTEDELRRVAEQKEQRQPPGQEENGEDPYA
GSTDENTDHEGPLESPDLPIPELPDFFQGKRFFLYGEFPGDERRRLSRYVTAFNGELEDY
MSERVQFVITAQEWDPSFEEALTDNPSLVFVRPRWIYSCSEKQKLLPHQLYGVVPRA
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgccggagatccgcctccgccatgtggtgtcctgcagtagccaggactcgacctactgt
gcagaaaaccttctcaaggcagacacttaccgtaaatggcgggcagccaaggcgggtgag
aagaccatctctgtggtgctccagttggagaaggaggaacagatccacagcgtggacatc
ggcaatgacggctcggccttcgtggaggtgctggtgggcagctcggccggaggcaccggg
gagcaggactatgaggtcctcctggtcacctcgtctttcatgtcccctgccgagagtcgc
agtggctcgaactccaaccgtgttcgtatctttgggcctgacaagctggtccgggcagca
gcagagaagcgctgggaccgagtcaaaattgtctgcagccagccctacagcaaggatgcc
ccctatggcctgagtttcgtacggtttcacagccccccagacaaagatgaggctgaggtc
tcatcccagaaggtgaccaagctcggccagttccgcgtgaaggaggaggatgagaatgct
agctccctgaaacccggggctctcttcttcagtcgtatcaacaagacacccccagtggca
gccagtgacccggcaggacccagctatgcagcggctacgctgcaggcctccagtgccgcc
gcctcagcctccccggtctccagggcagtaggcagcaccttcaaggtgagatcatcagac
cctgggggtgcggaaaaggaggagaagagctggaggcctcagcacaacccaccccctcag
cctcaggagtcccccaaaggcaagaggaagctggatttgaaccaagaagaaaagaagacc
cccagcaaaccatcagctcagccctcactacctgccctcaagagacccaaattgccagct
cccgcccgtaccccagccactcccccgacccctgccccagcacgagggccggcaccaggg
aagccccgaggagatggcgctgagcccagggccccccgcgcaggcccacaggagctgggg
aagatcctccagggtgtggtggtggtgctgagtggcttccagaaccccttccgctcggag
ctccgggacaaggcccttgagctgggggccaaatatcgaccggactggactccagacagc
acgcacctcatctgcgcctttgctaacacccccaagtacagccaggtcctcggcctcgga
ggccgaatcgtgcgcaaagagtgggtgctggattgtcaccgcatgcggcggcggctgccc
tcgcggaggtacctcatggctgggtcaggctcaagcagcgaggacgaggggggctctcac
agcggcggcagtggggatgaagcccccaaggctccccgaaagcgcccccagaccaaagcc
aagccccctcaggcagccggacccagctcaccccagagacccccaaccccagaagagacc
aaaccagcctcaccaggggcccaggaagataatgatgacactgaggcggagcaggcagaa
ggacaggacaacggggcagaagactctggggacaccgaggacgagctgagaagggtggct
gagcagaaggaacaaaggcagccccctggtcaggaggagaatggcgaggacccgtacgcg
ggatccacagatgagaacacggaccacgagggccccctggagtctcccgatctgccaatt
cctgagctcccagacttcttccagggtaaacgcttcttcctttacggggagttcccaggg
gacgagcggcggaggctcagccgctacgtcacagccttcaacggggagcttgaggactac
atgagtgagcgggtccagtttgtgatcaccgcacaggagtgggaccccagctttgaggag
gccctgacggacaacccttccctggtgttcgtccgcccccgctggatctacagctgcagc
gagaagcagaagctacttccccatcagctctacggggtggtgccccgggcgtga

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