Cervus canadensis (wapiti): 122421329
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Entry
122421329 CDS
T07554
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122421329 (PKD1L2)
04091 Lectins [BR:
ccad04091
]
122421329 (PKD1L2)
Ion channels [BR:
ccad04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122421329 (PKD1L2)
Lectins [BR:
ccad04091
]
C-Type lectins
Others
122421329 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Ion_trans
Lectin_C
REJ
GPS
GPR128_GAIN_subdomA
Motif
Other DBs
NCBI-GeneID:
122421329
NCBI-ProteinID:
XP_043293117
LinkDB
All DBs
Position
18:57145363..57258185
Genome browser
AA seq
2497 aa
AA seq
DB search
MSTLAVVLLGLALGFGAITAKPEDGSFCSKSQVAFRDACYEFVSLGRTFYGAQSWCEGQG
GHLVFIRDEGTQQFLQKHLSQDREWWIGLTGNSARNETAEGPRIWMDASCVSYSHWHRGQ
DASAPNTCSYIGRDPSFRWVASDNCTQELAFICEFGVGQSLACEGLNATMHCGSGEVIQI
QEAFYGRQTPHYCIQDARRRSDLEEECSWVSVKDEVAGQCQGLQACQVAADGTYFGDLCP
SRGSYLWVQYLCREGLQLMVSNESFIFDNVTISLTWLLSPYIGNLSCIINTGDGHIFDPY
YPPSLSSRVTHQFTAPGDFTVFAECSTSEWHVMAQKQVMIQDNTDRLRVTGCSGLTTSGA
SPFCRAVFGDPLWVQVELDGGTGVTYTVLSGNTTLAEFTTQRGPLPYNLTLDRGVQRQMG
PGMHYLEIRATSDTTTSTPSRNITVHFVEALSGLQASLASDHLELGQDLLVNVSVAHGIP
EGLTFEVAGLNTTFSYEKENLRGSFGTYHVAVPLEGTFLVTVLVRDTFSNLSLEIGSITV
TAPSSLQEPPGTKVQRKNRDKGNMELYVEPGRYLDPFTTVTLGWPDGDKDLRFQWACGRC
WAQWSDCVERQLLRTDQRELVVPPSCLPPSDSAVTLRLTVWRGLQLENLGEQCLYVSAPL
ELRPRVSCEENCGPVDVSRDVTLKVTMGDKSAAAMFSWYLDDTPLEKAEPLPEACSLRGF
WPRSSILLQSNTSTLLLNSSFLRIHGPAAWIRVTAVTGCAYGEDTYVVSSLPPLEVPTCT
VAPEEGTILTSFAIFCNASAALGPLEYCFCLESGSCLHCGPEPALPSVYLPLGKENNDFM
LTVVISVSNHVGGRQQTQAVVKVGPGHTCVEEEAFQATVWDNVTAILQGGHGPEQLFQLA
RAVSSVLDQRLGSRQLPRVDTRHKVRERILGSLSVVRVTRGDMQRVQGLAEVLKEVTQRS
EELTPLAQREAGWALQRASEGLLAVSAEAHPEDWRRQAATRDLLQAVGNVLEASLRDQSE
EPAQANGSQMATVSQLLQAAEHVQVALLLGRLPGSLPAMVTTPSISVYTNRIQPRSWRGS
SVHIAAASSATFTLPATLSLGSMEDYREPVDIRMMSFPKSPFPARGHFDVSGTVGGLSLT
SPSGQRIPVKNLSEYIEILLPRLSEGHSEPTVLNLSRPEALRVNLMSGSAALGIQLHWRP
DAPLTLSLGYGYHPNETSYDAQAHLLPTAAPDELSTWILSPEDLHFGEGVYYLTVIPESD
LEPAPGRDLTVGITTFLSHCVFWDEVQGTWDNSGCQVGPRTTLSQTHCLCNHLTFFGSTF
LVMPNAVDVRQTAKLFATFEDNPVVVTTVSCLFVAYLLVLIWARRKDAQDQAKVKVTVLE
DNDPFAQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGESEPHHLLDPNIPVFERGGVDVF
LLSTLFPLGELRSLRLWHDNSGDQPSWYVSQVLVHDLAMDQKWYFLCNSWLSIDVGDCVL
DKVFPVATEEDRKQFSHLFFMKTSKGFQDGHIWCSIFSSSARSNFTRVQRVSCCFSLLLC
TMLTSIMFWGVPKDPAEQKMDLGQIEFTWQEVMIGLESSLLMFPINLLIVQIFRNTRPWV
AKEQNAGKWDRRSLSLAPPPQPMEDGLLTPEAVTKDLWRLVSNLFKALKVPPPLLGWDST
NSMNINQLLALMEDVICRQNKAGQVFSDEASQTGAPLTLTLGSVQVKENMQRLRPKVGPS
DAWKNSAYRQCLYLQLEHLEQELLLLEPQGSSQGQSRTRALGQLQTLKGCLVAQAGTLPP
AHSSSLQASKLPRGLPWWCVLVGWLLVVVTSGVAAFFTMLYGLHYGWTSSLKWLISMAVS
FVESVFVTQPLKVLGFAAFFALVWKRVEDEEEPVAPLPGRLSGPDPSALFRARRNSRRDI
YRPPLASDIEKMKTTHLKEQKALALIREILAYLGFLWMLLLVAYGQRDPCAYHFNRHLEH
SFTRGFSTVLSFQQFFTWANTTLMSNLYSHYPGFVTDGNAKLVGSAQIRQVRVQESSCLL
APQLQAFLDRCRAPYSLDVEDLSDYGEGWNASVLNNSNDFSQAWRYQSQSQRRGYPLWGK
LTVYRGGGYVVPLGTDRQSASRTLQYLFDNTWLDSLTRAVFVEFTVYNANINLFCTITLT
LETSALGTFFAHAHLQSLRLYPFTDGWHPFVVAAEIVYFLFLLYYMVVQGKLLRKQKWCY
FHSKWNILELAIILASWSALAVFVKRTVLVERDLQRYRKHREEGISFSETAAADAALGYI
LAFLVLLSTVKLWHLLRLNPKMNMITSALRRAWGDISGFIVVILIMLLAYSIASNLIFGW
KLRSYKTLFDAAETMISLQLGIFNYEEVLDYSPVLGSFLIGSCIVFMTFVVLNLFISVIL
VAFNEEQKYYQLSEEGEIVDLLLMKILSFLGIKCKRQEPGSSSEQAFRASTPLQLAALSD
PAPPGAPPPRPRSSQLAPARSGPGPPRPAPPPPAGVL
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccttggccgtggtactcctggggcttgctctggggtttggggccattactgct
aagccagaggacggcagcttttgctctaagagccaagtggctttcagagatgcttgctat
gaatttgtgtctctcggacgcaccttctatggtgcccagagctggtgtgaggggcaagga
ggccacctggtcttcattcgtgatgaaggcacccagcaatttctgcagaagcacctctcc
caggacagggaatggtggattggactcacagggaactcagctcggaatgaaactgcagaa
gggcccaggatctggatggacgcctcgtgtgtgagctacagccactggcaccgagggcag
gacgcttctgcacccaacacctgcagctacatcggaagagacccttcctttaggtgggtg
gcctcagacaactgcacgcaggagttggccttcatctgcgagtttggtgtcggccagagt
ctggcctgcgagggcctcaatgccaccatgcactgcggctcgggggaggtcatccagatc
caggaggctttctatgggcgccagacaccccattactgcatccaggatgccagacgccgc
tcagacctggaggaggaatgcagctgggtcagcgtcaaggatgaagtggcaggccagtgc
caggggctgcaggcctgccaggtggcagcagatgggacctactttggagacctgtgcccc
agccggggcagctacctgtgggtgcagtacttgtgccgggaaggcctacagttgatggtg
tccaatgagagtttcatctttgacaatgtcaccatctcccttacatggcttctctctccc
tacattggaaacctgtcctgtataattaatacaggagacggccacattttcgatccctac
tacccacccagtctgtccagcagagtgacccaccaattcacagcccctggggatttcacc
gtgtttgctgagtgttcgaccagcgagtggcatgtgatggctcagaagcaagtgatgatt
caagacaacacagacaggctccgtgtgactgggtgctctggcctgactacatcaggagcc
agccccttctgccgggcagtcttcggggaccctctgtgggttcaggtggagcttgatgga
ggaacaggggtgacttacaccgtgctgtcaggtaacacaaccctggctgagttcaccacg
cagaggggcccgctgccgtacaacctgaccctggacagaggagtccagcgccaaatgggc
ccagggatgcactacctggagatccgagccaccagcgacaccaccacctccaccccctcc
agaaacatcactgtccacttcgtggaggctctgtcggggcttcaggcctccttggcttct
gaccacttggagcttggacaggacctactagtcaacgtctcggtggctcacggcatccca
gagggtttgacctttgaggtggcaggactcaatacaaccttctcctatgagaaagagaac
ctcagagggtcatttgggacttaccatgtggcggttcctcttgaaggcacctttctggtc
actgtactggtgagggacaccttctcaaacctgagtttggaaattggaagcatcactgtc
acagctccttccagtctccaagaaccacccggaacaaaggtccagagaaagaatagagac
aaagggaacatggagctgtacgtggaacctggtcggtacttggatcctttcaccacagtg
accctgggctggccagatggggataaggacttacgcttccagtgggcatgtgggcgctgc
tgggcccagtggagcgactgtgttgagaggcagctgctccgcacagaccagagggagctg
gtggttccgccgtcctgcctgccgccctcggactctgctgttaccctgcgcctgacagtc
tggagaggcctgcagctggagaacctgggggagcagtgcctctatgtgtccgcccccctg
gaactcaggccacgagtcagctgtgaggagaactgcgggccagtggacgtcagcagggat
gttacgctgaaggtcaccatgggggacaagtcagcagcagccatgttcagctggtatttg
gatgacaccccactggagaaggctgagcccctccctgaggcctgcagcctccgaggattc
tggccacgttcttcaatcctccttcagagcaacacctccaccctgctgctcaacagctcc
ttcctgaggatccacggcccggccgcctggatcagagtcacagcagtgaccgggtgtgcc
tacggggaggacacctatgtggtcagctccctgcctcccctggaggtgcccacctgcacc
gttgccccagaggaggggaccatcctgacgagcttcgccatcttctgcaacgcctccgct
gccctgggccccctggagtactgcttctgcctggagtcaggttcctgtctacactgtggc
cctgaacctgccctcccatcagtttacctgccacttggaaaagaaaacaatgacttcatg
ctgacagtggtcatttctgtctccaatcacgtgggggggagacagcagacccaggcagtg
gttaaggtgggacctggacacacctgtgtggaggaggaagcattccaggccacagtgtgg
gacaatgtcaccgccattctgcagggcgggcatggccctgagcagctcttccagctggcc
agggccgtgtcatccgtactggaccagaggctgggctccaggcagctgccgagagtggac
accagacacaaggtcagagaacgtatcctggggtcactgtctgtggtcagggtcaccaga
ggggacatgcagagggtgcaggggctggctgaggtgctgaaagaggtgacccagcgcagt
gaggagctcacgcccttggcccagcgggaggccggctgggctctgcagcgcgccagtgag
ggcctgctggcagtgagtgccgaggcccatcctgaggactggaggcgccaggcggccacc
agggacctgctccaggctgtgggtaatgtgctggaagcttccctgagggaccagtcagaa
gagcctgcacaggccaatggcagccagatggccacagtgtcccagctgctgcaagctgca
gagcatgtgcaggtcgccctcctgctggggagactacccgggagccttccggccatggtg
accaccccctccatctctgtgtacacaaacagaatacagccccggagttggcgaggctcc
tccgtgcacattgctgcagccagttctgcgaccttcaccttgcccgctaccctctccctt
ggctccatggaggactatcgggagcctgtggacataaggatgatgagcttccccaagagc
ccctttccagcccgaggtcactttgatgtcagcggaactgtgggtggcctctctctgacc
agtcctagtggacaacgcatccctgtgaagaatctgtcagagtatatcgagatcctgctg
cctcggctttcagaaggacacagcgagccaaccgtgctgaacctgagcagacctgaagct
ctgcgagtgaacctgatgtcaggcagcgcagctttagggatccagcttcactggagacct
gacgccccactcacgctcagcctgggctatggctaccaccccaatgagaccagctacgat
gcccaggctcacctcctgccaacggctgctccagatgagctgtccacgtggatcctgagt
ccagaggacctgcattttggagaaggtgtctattatctgactgtgatccctgagtctgac
ctggagccggctcccggcagggacctcacagtcggcatcaccaccttcctgtcccattgt
gttttctgggatgaggtccagggcacttgggacaactccgggtgccaggtggggccgcgg
accaccctctcgcagacccactgcctctgcaaccacctcaccttctttgggagcacgttc
ctggtgatgcccaacgctgtggatgtccgccagactgctaagctctttgccacctttgag
gacaaccctgtggttgtgactaccgtgagctgcctcttcgtggcctaccttctggtgttg
atctgggcaaggaggaaggatgctcaggatcaagccaaggtaaaggtcacagtgctggag
gacaacgacccctttgctcagtaccactacctggtgacagtctacaccggacaccggagg
ggggcagccacttcctcaaaggtgaccgtcaccctgtatggcctggatggagagagtgag
ccccaccacctgttggaccccaacatcccggtttttgagcgagggggagtggatgtcttc
ttgctctccaccctgtttcccctgggggagctgaggagcctgcgactatggcatgacaac
tcaggggaccagccatcctggtatgtaagccaggtgctggtgcacgacctggcaatggac
cagaagtggtacttcctctgcaactcatggctgtccatcgatgtcggagactgtgtcctt
gacaaggtatttccggtggccacagaggaggacaggaaacaattcagccacctgtttttc
atgaagacctccaaaggcttccaggatggccacatctggtgctccatcttcagcagctca
gctcggagcaacttcacacgtgtccagagggtgtcctgctgcttctcactgctcctctgc
accatgctgaccagcatcatgttctggggtgtccccaaggacccagctgagcaaaagatg
gacttgggtcaaatcgagttcacttggcaggaagtgatgattgggctggagagctcactc
ctcatgttccccatcaacctcctgatcgttcagatctttcggaatacccgtccttgggta
gccaaggaacagaatgctgggaaatgggacaggaggagcctcagcctggcgcccccacca
cagcccatggaggatggccttctgacgcctgaagcagtgaccaaggatctgtggagactt
gtcagcaacctgttcaaagctctgaaggtgccacctcctctcttgggctgggactccaca
aactcaatgaatatcaaccaactgctggccttgatggaagacgttatctgtcgacagaac
aaagcagggcaggtcttctcagacgaagccagccagacaggggcccctttaacactcact
cttgggtcagtacaagtaaaagaaaacatgcaacgcctcaggcccaaggtgggcccaagt
gatgcctggaagaacagtgcctaccggcagtgtctctaccttcagctggagcacctggag
caagagctgctgctgctggagccccagggctcctcccagggtcagagccgcaccagggca
ctagggcagctgcagaccctgaagggctgtctggtggcacaggctggaaccctgccccca
gcacactccagttccttgcaggcaagcaagctccctcgaggcctgccctggtggtgtgtc
ctggtgggctggctcctggtggtagtcacaagcggggtggcagccttcttcaccatgctc
tacggcttgcactatggatggaccagctccctcaagtggctcatctccatggccgtctcc
ttcgtggagagcgtgtttgtcacccagccactgaaggtgctggggttcgcagctttcttt
gcgctggtgtggaagcgcgtggaggatgaggaggagcctgtggcccccctcccgggacgt
ctctccggcccagacccctctgccttgttccgagcgcgaagaaacagcagaagggatatc
taccggccacctctagcctctgacattgagaagatgaaaaccacgcacctcaaggagcag
aaagcacttgctttaatcagagaaatcttagcgtacctgggctttctgtggatgctgctg
ctggtcgcctatgggcagagggacccctgcgcctatcacttcaacagacacctcgaacac
agcttcacccgaggcttttcaaccgtgctgagcttccagcagttcttcacatgggccaac
accaccctcatgagcaacctgtatagtcattacccaggctttgtcactgatgggaacgcc
aagctggttggcagtgctcagattcgccaagtgagggtccaggagagctcctgccttctt
gccccgcagctgcaggcttttcttgacaggtgccgtgcaccatattccctggatgtggaa
gacctgtcagactatggggaaggctggaatgcctctgtcctcaacaacagcaatgacttt
tcccaggcttggcggtaccagagccagagccagcgccgagggtatcccctctggggcaaa
ctcaccgtgtaccggggaggaggttatgtggtccccttggggactgatcgccaaagtgca
tcaagaaccctccagtatctctttgacaacacctggctggacagcttgaccagagccgta
tttgtggagttcacggtctacaacgctaacatcaacctgttctgcactatcactctgact
ctggagaccagcgcccttggaaccttctttgcacatgcgcacctgcagagcctacgcctg
tacccctttactgacggctggcaccccttcgtggtagccgcggagatcgtctacttcctg
ttcctcctctactacatggttgtgcagggcaagctcctgaggaagcaaaagtggtgctat
ttccacagcaagtggaacattctggagctggccatcatcctggccagctggagtgccctg
gcagtgtttgtgaagaggaccgtcctggtggagcgtgacctccagcgctaccggaaacac
agggaggaagggatcagcttcagcgagactgcagcagctgacgctgcccttggctacatc
cttgccttcctggtcctcctgtccacagtgaagctttggcatctgctcaggctgaacccc
aaaatgaacatgatcacgtcagctctgcgtcgtgcctggggggacatttcaggctttatc
gtcgtcatccttatcatgctcctggcttactccattgcatcaaacttaatctttggctgg
aaactccgttcctacaaaactctctttgatgcggcagaaacaatgatcagccttcagctg
ggaatcttcaactacgaggaggtcctggactacagcccagtgcttggctccttcctaatt
gggtcctgcatcgttttcatgacgtttgtggtgctgaatttgtttatctctgtcatcctg
gtggcgttcaatgaggagcaaaaatactatcagctgtcggaggaaggagagatcgtcgat
ttgctactgatgaagatactcagttttctgggcattaaatgtaaaagacaggagcctgga
agcagcagtgagcaggctttccgagcgtccacgcccctccagcttgcggccctgtcagac
cccgcccctcccggggccccgcccccgcgcccccggtccagccagctcgctccggctcgc
tccggcccggggccgccccgccccgctccgcccccgccggccggggtgctctag
DBGET
integrated database retrieval system
