Cervus canadensis (wapiti): 122421614
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Entry
122421614 CDS
T07554
Symbol
LRFN1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccad04515
]
122421614 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
122421614 (LRFN1)
Cell adhesion molecules [BR:
ccad04515
]
Immunoglobulin superfamily
SALM family
122421614 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122421614 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_9
LRR_5
LRR_14
Ig_DSCAM-DSCAML_C
CbiM
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
122421614
NCBI-ProteinID:
XP_043293708
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All DBs
Position
18:23957276..23969447
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AA seq
771 aa
AA seq
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MAPGPFSSALLSLPPTALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVP
PAIDRRVVELRLTDNFIAAIRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHL
DSNRLAEVRGDQLRGLGNLRHLILGNNQIRRVESAAFDAFLSTVEDLDLSYNNLEALPWE
AVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGPGPK
PPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPL
ITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTIT
TLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGAN
ESAAERRLVAAELTSNSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLV
NDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAI
GGVIVASVLVFIVLLMIRYKVYGDGDGRRVKGTSRSPPRVSHVCSQTNGAGATQAPPPPA
PDRYEALREVAAPAAAAAAAVEAKAAAADLASAETEAALGRSLGGSATSLCLLPSEETSG
EESRAAAGPRRSRSGALGPPASPPPTLALVPGGAPARPRPQQRYSFDGDYGALFQSHSYP
RRARRTKRHRSTPHLDGAGGGAAGEDEDLGLGSARARLAFTSTEWMLESTV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggctccgggccccttctcctcagcgctcctctcgctgccgcctactgccctgcccttt
ctgctgcttctctgggcaggggcatcgcggggccagccctgccctggccgctgcatctgc
cagaacgtggcgcccacgctgaccatgctgtgcgccaagaccggcttgctcttcgtgccg
ccggctatcgaccggcgcgtggtggagctgcggctcaccgacaactttatcgcggccatc
cgccgccgagacttcgccaacatgaccagcctggtacacctcaccctctcccggaacacc
attggccaggtggcagcgggcgcctttgcggacctgcgcgccctccgcgccctgcacctc
gacagcaaccggctggcagaggtccgaggcgaccagctccggggtttgggcaacctccgc
cacctgatcctgggtaacaaccagatccgccgggtggagtcggccgctttcgacgccttc
ctgtccaccgtggaggacctggatctgtcctacaacaacctggaggccctgccctgggag
gccgtgggccagatggtgaacctcaacaccctcacgctggaccacaacctcatcgaccac
atcgccgaagggacctttgtgcagcttcacaaactggttcgcctggacatgacctccaac
cgcctgcataaactgccccctgatgggctcttcctgcggtcccaaggtccgggacccaag
ccgcccacgccgctcacggtcagcttcggcggcaaccccctgcactgcaactgtgagctg
ctgtggctgcggcggctgaccagggaggacgacctggagacgtgtgccacgccggagcac
ctcaccgaccgctacttctggtccatccccgaggaggagtttctgtgtgagcctccgctg
atcacgcggcaggcgggcggccgggccctggtggtggagggccaggcggtcagcctgcgg
tgccgcgccgtgggggaccctgagcccgtggtgcactgggtggcacccgacgggcgcctg
ctggggaactcgagccggacccgggtccggggggatgggaccctggatgtgaccatcacc
accttgcgggacagcggcacgttcacttgcatcgcctccaacgccgccggggaagccacc
gcaccggtggaggtgtgcgtcgtgcctctgcctctgatggcgcccccgcctgctgccccg
ccgcctctcacggagcctggctcctcggacatcgccacgcctggccgacctggagccaat
gagtcggcggctgagcgccggctcgtggcggccgagctcacctccaactctgtgctcatc
cgctggccggcccagaggcccgtgcctggcatccgcatgtaccaggtgcagtacaacagc
tccgcagacgactctcttgtctacaggatgatcccatccaccagccagaccttcctggtg
aatgatctggcagcgggccgcgcctacgacctgtgcgtgctggccgtctacgacgatggg
gccacggcactgccggccacccgagtggtgggctgcgtgcagtttactaccgctggggat
ccggcaccctgccgcccgctgagggcccatttcttgggcggcaccatgatcatcgccatc
gggggtgtcattgtcgcctccgtcctcgttttcatcgttctgctcatgatccgctacaag
gtctacggcgatggggatggccgccgagtcaagggcacctccaggtcgcctccgcgggtc
agccacgtgtgctcgcagaccaacggcgcaggcgcaacgcaggccccgcccccgccggcg
cccgaccgctacgaggcgctgcgcgaggtggcggctcccgcggctgcggcggcggcggcc
gtcgaggcgaaggccgcggcggccgacctggcttccgcggaaacggaggcggcccttgga
cgttccctgggcggctcggccacctcgctgtgcctgctgccatccgaggaaacctccggg
gaggagtcccgggccgcggcgggccctcggaggagccgttccggggccctgggaccgccg
gcttcaccgccccccactttagctctggttcctgggggagccccggcccggccgaggcct
cagcagcgttattcgttcgacggggactacggggcgctcttccagagccacagttacccg
cgccgcgcccggcggacaaagcgccaccggtccacgccgcacctggacggggccggaggg
ggcgcggccggggaggacgaagacctggggctgggctccgccagggcgcgcctggccttt
accagcaccgagtggatgctggaaagtaccgtgtga
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