KEGG   Cervus canadensis (wapiti): 122421614
Entry
122421614         CDS       T07554                                 
Symbol
LRFN1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
  KO
K16354  leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
ccad  Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ccad04515]
    122421614 (LRFN1)
   04990 Domain-containing proteins not elsewhere classified [BR:ccad04990]
    122421614 (LRFN1)
Cell adhesion molecules [BR:ccad04515]
 Immunoglobulin superfamily
  SALM family
   122421614 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:ccad04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   122421614 (LRFN1)
SSDB
Motif
Pfam: LRR_8 LRR_4 I-set Ig_3 ig Ig_2 fn3 LRR_9 LRR_5 LRR_14 Ig_DSCAM-DSCAML_C CbiM C2-set_3 Sp38
Other DBs
NCBI-GeneID: 122421614
NCBI-ProteinID: XP_043293708
LinkDB
Position
18:23957276..23969447
AA seq 771 aa
MAPGPFSSALLSLPPTALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVP
PAIDRRVVELRLTDNFIAAIRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHL
DSNRLAEVRGDQLRGLGNLRHLILGNNQIRRVESAAFDAFLSTVEDLDLSYNNLEALPWE
AVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGPGPK
PPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPL
ITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTIT
TLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGAN
ESAAERRLVAAELTSNSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLV
NDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAI
GGVIVASVLVFIVLLMIRYKVYGDGDGRRVKGTSRSPPRVSHVCSQTNGAGATQAPPPPA
PDRYEALREVAAPAAAAAAAVEAKAAAADLASAETEAALGRSLGGSATSLCLLPSEETSG
EESRAAAGPRRSRSGALGPPASPPPTLALVPGGAPARPRPQQRYSFDGDYGALFQSHSYP
RRARRTKRHRSTPHLDGAGGGAAGEDEDLGLGSARARLAFTSTEWMLESTV
NT seq 2316 nt   +upstreamnt  +downstreamnt
atggctccgggccccttctcctcagcgctcctctcgctgccgcctactgccctgcccttt
ctgctgcttctctgggcaggggcatcgcggggccagccctgccctggccgctgcatctgc
cagaacgtggcgcccacgctgaccatgctgtgcgccaagaccggcttgctcttcgtgccg
ccggctatcgaccggcgcgtggtggagctgcggctcaccgacaactttatcgcggccatc
cgccgccgagacttcgccaacatgaccagcctggtacacctcaccctctcccggaacacc
attggccaggtggcagcgggcgcctttgcggacctgcgcgccctccgcgccctgcacctc
gacagcaaccggctggcagaggtccgaggcgaccagctccggggtttgggcaacctccgc
cacctgatcctgggtaacaaccagatccgccgggtggagtcggccgctttcgacgccttc
ctgtccaccgtggaggacctggatctgtcctacaacaacctggaggccctgccctgggag
gccgtgggccagatggtgaacctcaacaccctcacgctggaccacaacctcatcgaccac
atcgccgaagggacctttgtgcagcttcacaaactggttcgcctggacatgacctccaac
cgcctgcataaactgccccctgatgggctcttcctgcggtcccaaggtccgggacccaag
ccgcccacgccgctcacggtcagcttcggcggcaaccccctgcactgcaactgtgagctg
ctgtggctgcggcggctgaccagggaggacgacctggagacgtgtgccacgccggagcac
ctcaccgaccgctacttctggtccatccccgaggaggagtttctgtgtgagcctccgctg
atcacgcggcaggcgggcggccgggccctggtggtggagggccaggcggtcagcctgcgg
tgccgcgccgtgggggaccctgagcccgtggtgcactgggtggcacccgacgggcgcctg
ctggggaactcgagccggacccgggtccggggggatgggaccctggatgtgaccatcacc
accttgcgggacagcggcacgttcacttgcatcgcctccaacgccgccggggaagccacc
gcaccggtggaggtgtgcgtcgtgcctctgcctctgatggcgcccccgcctgctgccccg
ccgcctctcacggagcctggctcctcggacatcgccacgcctggccgacctggagccaat
gagtcggcggctgagcgccggctcgtggcggccgagctcacctccaactctgtgctcatc
cgctggccggcccagaggcccgtgcctggcatccgcatgtaccaggtgcagtacaacagc
tccgcagacgactctcttgtctacaggatgatcccatccaccagccagaccttcctggtg
aatgatctggcagcgggccgcgcctacgacctgtgcgtgctggccgtctacgacgatggg
gccacggcactgccggccacccgagtggtgggctgcgtgcagtttactaccgctggggat
ccggcaccctgccgcccgctgagggcccatttcttgggcggcaccatgatcatcgccatc
gggggtgtcattgtcgcctccgtcctcgttttcatcgttctgctcatgatccgctacaag
gtctacggcgatggggatggccgccgagtcaagggcacctccaggtcgcctccgcgggtc
agccacgtgtgctcgcagaccaacggcgcaggcgcaacgcaggccccgcccccgccggcg
cccgaccgctacgaggcgctgcgcgaggtggcggctcccgcggctgcggcggcggcggcc
gtcgaggcgaaggccgcggcggccgacctggcttccgcggaaacggaggcggcccttgga
cgttccctgggcggctcggccacctcgctgtgcctgctgccatccgaggaaacctccggg
gaggagtcccgggccgcggcgggccctcggaggagccgttccggggccctgggaccgccg
gcttcaccgccccccactttagctctggttcctgggggagccccggcccggccgaggcct
cagcagcgttattcgttcgacggggactacggggcgctcttccagagccacagttacccg
cgccgcgcccggcggacaaagcgccaccggtccacgccgcacctggacggggccggaggg
ggcgcggccggggaggacgaagacctggggctgggctccgccagggcgcgcctggccttt
accagcaccgagtggatgctggaaagtaccgtgtga

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