Cervus canadensis (wapiti): 122422129
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Entry
122422129 CDS
T07554
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122422129 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
122422129 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122422129 (PDLIM5)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122422129
NCBI-ProteinID:
XP_043294327
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All DBs
Position
19:34054917..34278652
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AA seq
601 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAHG
MTHLEAQNKIKGCTGSLNMTLQRASAAPKLEPVPVQKGEPKEVVKPVPIPSPAVSKVTST
TNTAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSPHASPPPVAAVTSPPLAASGPH
ANTSLSADQRSSALSAGKPAVNVPRQPTVSSVCAETAQELAEGQRRGSQGDSKQQNGKIP
PKRPPRKHIMDRNTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
LKESEADNTKKANNAQEPSQQSAPSAAAAWSSPERPGSPGSTRPGVAGLTTAAAFKPLGS
SGIKSPSWQRPSQAAPSAGRVVSSGPSTGVVAPANSARGQPQPSDEDTLVQRAEHIPAGK
RTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCRNTMAYIGFVEEQGALYCELCYEKFF
APECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFG
TICRGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVN
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagtgtgtccttggtgggcccagctccctggggtttccggctgcaaggt
ggcaaggatttcaacatgcctttgacaatctcaagtctaaaagatggtggcaaagcatcc
caggcaaacgtaagaataggcgacgtggttctcagcattgatggaataagtgcccatggc
atgactcatctggaagcccagaacaagattaagggttgtacaggctctttgaatatgact
ctgcaaagagcatctgctgcacccaagcttgagccagttcctgttcaaaagggagagcct
aaagaagtagtcaaacctgtgcccattccatctcctgctgtgtccaaagtcacttccaca
accaacacggcctacaataaggccccgcggccctttggttccgtgtcttcaccaaaagtc
acatccatcccatcaccatcgtctgccttcaccccagcccacgcgaccacttcaccacat
gcttcccctccacccgtggccgctgtcacctctcccccactcgctgcgtctggaccgcat
gctaacaccagtcttagtgctgaccagcggtcatccgctctgagcgctggtaaacctgca
gttaatgtcccacggcagcccacagtcagcagcgtgtgtgccgagactgcccaggagcta
gcggagggacagcgaagaggatcccagggtgacagtaaacagcaaaatgggaaaatccca
cccaaacgcccaccaagaaaacacattatggatcgtaatactgagttttatcacatacct
actcacagcgatgccagcaagaagagactgattgaggatactgaagactggcgtccgagg
actggaacgactcagtctcgttctttccgaatccttgcccagatcactgggactgaacat
ctgaaagagtctgaagctgataatacaaagaaggcaaacaatgcccaggagccttctcag
cagtctgcgccatcagcagctgcagcttggagctcccccgagaggccgggaagcccaggc
tcgaccagaccaggggtggccgggctcaccactgctgctgccttcaagcctctggggtcc
agtgggatcaagtcaccaagctggcaacggcccagccaagcagcaccttccgctggaaga
gtcgtaagcagtggaccatccacaggagtcgtggcaccagccaactcagccagagggcag
cctcagcccagtgatgaggacactttggtgcaaagggccgagcatattcccgcagggaaa
cgaactccaatgtgcgcccactgcaaccaggttatcaggggaccattcctagtggcattg
gggaaatcttggcacccagaagagtttaactgtgctcactgcagaaatacgatggcctac
attggatttgtagaggagcagggagccctgtattgtgagctctgctatgagaaattcttt
gctccagaatgtggtcgatgccaaaggaagatccttggagaagtcatcaatgctttaaaa
caaacttggcatgtctcctgttttgtgtgtgtggcctgtggaaagcctattcgtaataat
gtttttcacttggaggatggtgagccctactgtgagactgattattatgccctctttggt
actatatgccgtggatgtgaatttccaatagaagctggcgacatgttcctggaagctctg
ggctatacctggcatgacacttgttttgtatgctcagtatgttgtgaaagtttggaaggt
cagacctttttctctaagaaggacaagccgctttgcaagaaacatgctcattctgtgaat
ttttaa
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