Cervus canadensis (wapiti): 122422394
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Entry
122422394 CDS
T07554
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04360
Axon guidance
ccad04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122422394 (SLIT2)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122422394 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccad00536
]
122422394 (SLIT2)
Glycosaminoglycan binding proteins [BR:
ccad00536
]
Heparan sulfate / Heparin
Axon guidance molecules
122422394 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRR_1
LRRCT
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
122422394
NCBI-ProteinID:
XP_043294819
LinkDB
All DBs
Position
19:complement(24620404..25003884)
Genome browser
AA seq
1530 aa
AA seq
DB search
MHGVGWQTLSLSLGLVLAILNEVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSA
KEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELRL
NNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHK
MFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLN
LLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNS
CSPLSRCPAECTCLDTVVRCSNKALKILPKGIPRDVTELYLDGNQFTLVPKELSNYKHLT
LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVV
PEGAFNDLAALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTT
PSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHA
CISNPCKHGGTCHLKEGEKDGFWCICADGFEGENCEINVDDCEDNDCENNSTCVDGINNY
TCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFDDC
QDHKCKNGAHCTDAVNGYTCTCPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRI
NEPICQCLPGYQGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQIATDEDSGILLYK
GDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGS
PKIITNLSKQSTLNFDSPLYVGGMPGKNNVAAALRQAPGQNGTSFHGCIRNLYINSELQD
FRKVPMQTGILPGCEPCHKKVCAHGTCQPSSQAGFTCECEEGWTGPLCDQRTNDPCLGNK
CVHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGKCRLSGLGQPYCECS
SGYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCAGGQCCGPLRSKR
RKYSFECTDGSSFVDEVEKVVKCGCTRCAS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgtcggctggcagacgctgtccctgtctctggggttagtgctggcgatcctg
aacgaggtggcgccgcaagcgtgtccggcgcagtgctcctgctccgggagcacagtggac
tgtcacgggctggcgttgcgcagtgtgcccaggaatatcccccgcaacaccgagagactg
gatttgaatggaaataacatcacaaggattaccaagacagattttgctggtcttcgacac
ctaagagttcttcagcttatggagaataagattaccaccattgaaagaggagcattccag
gatcttaaagaactggagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgctgtttcttgggacttcgaagctatacaggctcgacctcagtgaaaaccagattcag
gcaattccaaggaaagcttttcgtggggcagttgatattaaaaatctgcaactggattac
aaccagatcagctgtattgaagatggggcattcagggctctccgggacctggaagtgctc
actctcaacaataacaacattactagactttctgtggcaagtttcaaccatatgcctaaa
cttaggacttttcgactccattcgaacaacctatattgtgactgccacctggcctggctc
tccgactggctgcgccaacggcctcgcgtgggcctctacactcagtgtatggggccgtct
cacctgaggggccacaatgtagctgaggttcaaaaacgagaatttgtctgcagcggtcac
cagtcatttatggctccttcttgcagtgttttgcactgcccagctgcttgtacctgtagc
aacaacatcgtagactgccgtgggaaaggtctcactgagatccccacaaatctgccagag
accatcacagaaatacgtttagaacagaactcaatcaaggtcatccctcctggagctttc
tcaccatataaaaagcttagaagaatcgacctgagcaataatcagatctctgagctagca
ccagatgctttccaaggactacgctctctgaattcacttgtcctctatggaaataaaatc
acagaactcccaaaaagtttatttgaaggactattttccttacagctactattactgaat
gccaacaagataaactgccttcgggtagatgcttttcaggatctgcacaacctgaacctt
ctctccttatacgacaacaagcttcagaccatcgccaaggggaccttttcacctctccgg
gccattcaaaccatgcatttggcccagaacccctttatttgtgactgccatctcaagtgg
ctggcggattatctccataccaacccaattgagaccagtggcgcccgctgcaccagtccc
cggcgactggcaaacaaaagaattggacagatcaaaagcaagaaattccgttgttcagct
aaagaacagtatttcattccaggtacagaagattatcgatcaaaattaagtggggactgc
tttgccgatttggcttgtcctgaaaagtgccgctgcgaagggaccacagtggactgctcc
aatcaaaaactcaccaagatcccagaccacattccccagtacactgcagagctgcgcctc
aacaataatgaatttacagttttggaagctacagggatcttcaagaaacttcctcagtta
cgtaaaataaactttagcaacaataagatcacagacattgaagagggagcgtttgaaggc
gcatctggcgtgaatgaaatacttctcacgagtaatcgtttggaaaatgttcagcataag
atgttcaagggcttggaaagcctcaagacgttgatgttgagaagtaatcgcataagctgt
gtagggaatgacagtttcataggactcagctctgtgcgtttgctttctttatatgataat
cagattactaccattgcaccaggagcttttgatactctccattctttatctactctaaac
ctcttggccaatcctttcaactgtaactgctacctggcttggttgggagaatggctcaga
aagaaaagaattgtaacaggaaatcctcgctgtcagaagccctatttcctcaaagaaatc
cccatccaggatgtggccattcaggacttcacttgtgacgacggaaatgatgacaacagc
tgttccccactctctcgctgtcctgcggagtgtacctgcttggacacagtggttcgatgt
agcaacaaagccttgaagatcttgcccaaaggaattccaagagacgtcactgaactgtat
ctggatgggaaccagtttaccctggttcctaaggaactctctaactacaaacatttaaca
cttatagacttaagtaacaacagaataagcactctctctaatcagagcttcagcaacatg
acccagctcctcaccttaattcttagttacaaccgtttgagatgtattcctcctcgaacc
tttgatggactgaagtctcttcgattactttctttacatggaaatgacatttctgttgtg
cctgaaggtgctttcaatgatcttgctgcattatcacacctagcaattggagccaaccct
ctttactgtgattgtaacatgcagtggttatccgactgggtaaagtcggaatacaaagag
ccgggaattgcgcgctgtgctggtcctggagaaatggcagataaactacttctcacaact
ccctccaaaaaatttacatgtcaaggtcctgtggatgtcaatattctagctaaatgtaat
ccctgcttatcaaatccatgtaaaaatgatggcacctgtaacaacgatccagttgacttt
tatcgctgcacctgtccatatggtttcaaggggcaggactgtgatgttccaattcatgca
tgcatcagcaacccatgtaaacatggaggaacttgccacttaaaagaaggagaaaaggat
ggattctggtgtatttgcgctgatggatttgaaggagaaaattgtgaaatcaatgttgat
gactgtgaagataatgactgtgaaaataactctacatgtgtcgatggaattaataactac
acatgtctttgcccgcctgagtacacaggagagttgtgtgaggagaaactggacttctgc
gcccaggacttgaacccctgccagcatgactccaagtgcatcctgacgccaaagggatac
aaatgtgactgcaccccaggatatgtaggagaacactgtgacatcgacttcgatgactgc
caagatcacaagtgtaagaacggagcccactgcaccgatgcggtgaacggttatacctgc
acctgtcctgaaggctacagtggcttgttttgtgagttttctccacccatggttctccct
cgtaccagcccctgtgataattttgactgtcagaatggagctcaatgcatcatcaggatc
aatgagccaatatgccagtgtttgcctggctaccagggagaaaagtgtgaaaaactggtc
agtgtgaattttgtaaacaaagagtcttatcttcagatcccttccgccaaggtccggcct
caaacaaacatcactcttcagattgccacagatgaagacagtggaatcctcctgtataag
ggtgataaagaccatatcgctgtagaactctaccgaggacgagttcgtgccagctatgac
accggctcccacccagcttctgccatttacagtgtggagacaatcaatgacggaaatttt
cacattgtggaactactcgccctggatcaaagtctctccctctcagtggacggagggagc
cccaaaatcattaccaacttgtcaaagcagtccactctgaattttgactcccctctctat
gttggaggcatgcccgggaagaacaacgtggccgcagctctgcgccaggcccctgggcag
aatggcaccagcttccacggttgcatccggaacctttacatcaacagcgaacttcaggac
ttccggaaggtgcccatgcagactggcatcctgcccggctgtgaaccatgccacaagaag
gtgtgtgcccacggcacatgccagcccagcagccaagccggcttcacctgtgagtgcgag
gaaggatggacagggccactctgcgatcagaggaccaatgacccctgtctcggaaataaa
tgcgtccatggcacctgcctgcccatcaatgcgttctcctacagctgcaagtgcctagag
ggccatgggggcgtcctctgtgatgaagaggaggatctgtttaacccatgccaggcgatc
aagtgcaagcatgggaaatgcaggctttcaggactggggcagccctactgtgaatgcagc
agcggatacaccggggacagctgtgatcgagaaatctcttgtcgaggggaacggataaga
gattattaccaaaagcagcagggctacgctgcttgccagacgaccaagaaggtgtctcgg
ttggaatgcagagggggctgtgcaggtgggcagtgctgcggacctctgaggagcaagcga
aggaaatactctttcgaatgcactgatgggtcctcgtttgtggacgaggtggagaaggtg
gtaaagtgtggctgtacccgctgcgcctcctaa
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integrated database retrieval system
