Cervus canadensis (wapiti): 122422394
Help
Entry
122422394 CDS
T07554
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122422394 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccad00536
]
122422394 (SLIT2)
Glycosaminoglycan binding proteins [BR:
ccad00536
]
Heparan sulfate / Heparin
Axon guidance molecules
122422394 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRR_1
LRRCT
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
122422394
NCBI-ProteinID:
XP_043294819
LinkDB
All DBs
Position
19:complement(24620404..25003884)
Genome browser
AA seq
1530 aa
AA seq
DB search
MHGVGWQTLSLSLGLVLAILNEVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSA
KEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELRL
NNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHK
MFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLN
LLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNS
CSPLSRCPAECTCLDTVVRCSNKALKILPKGIPRDVTELYLDGNQFTLVPKELSNYKHLT
LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVV
PEGAFNDLAALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTT
PSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHA
CISNPCKHGGTCHLKEGEKDGFWCICADGFEGENCEINVDDCEDNDCENNSTCVDGINNY
TCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFDDC
QDHKCKNGAHCTDAVNGYTCTCPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRI
NEPICQCLPGYQGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQIATDEDSGILLYK
GDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGS
PKIITNLSKQSTLNFDSPLYVGGMPGKNNVAAALRQAPGQNGTSFHGCIRNLYINSELQD
FRKVPMQTGILPGCEPCHKKVCAHGTCQPSSQAGFTCECEEGWTGPLCDQRTNDPCLGNK
CVHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGKCRLSGLGQPYCECS
SGYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCAGGQCCGPLRSKR
RKYSFECTDGSSFVDEVEKVVKCGCTRCAS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgtcggctggcagacgctgtccctgtctctggggttagtgctggcgatcctg
aacgaggtggcgccgcaagcgtgtccggcgcagtgctcctgctccgggagcacagtggac
tgtcacgggctggcgttgcgcagtgtgcccaggaatatcccccgcaacaccgagagactg
gatttgaatggaaataacatcacaaggattaccaagacagattttgctggtcttcgacac
ctaagagttcttcagcttatggagaataagattaccaccattgaaagaggagcattccag
gatcttaaagaactggagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgctgtttcttgggacttcgaagctatacaggctcgacctcagtgaaaaccagattcag
gcaattccaaggaaagcttttcgtggggcagttgatattaaaaatctgcaactggattac
aaccagatcagctgtattgaagatggggcattcagggctctccgggacctggaagtgctc
actctcaacaataacaacattactagactttctgtggcaagtttcaaccatatgcctaaa
cttaggacttttcgactccattcgaacaacctatattgtgactgccacctggcctggctc
tccgactggctgcgccaacggcctcgcgtgggcctctacactcagtgtatggggccgtct
cacctgaggggccacaatgtagctgaggttcaaaaacgagaatttgtctgcagcggtcac
cagtcatttatggctccttcttgcagtgttttgcactgcccagctgcttgtacctgtagc
aacaacatcgtagactgccgtgggaaaggtctcactgagatccccacaaatctgccagag
accatcacagaaatacgtttagaacagaactcaatcaaggtcatccctcctggagctttc
tcaccatataaaaagcttagaagaatcgacctgagcaataatcagatctctgagctagca
ccagatgctttccaaggactacgctctctgaattcacttgtcctctatggaaataaaatc
acagaactcccaaaaagtttatttgaaggactattttccttacagctactattactgaat
gccaacaagataaactgccttcgggtagatgcttttcaggatctgcacaacctgaacctt
ctctccttatacgacaacaagcttcagaccatcgccaaggggaccttttcacctctccgg
gccattcaaaccatgcatttggcccagaacccctttatttgtgactgccatctcaagtgg
ctggcggattatctccataccaacccaattgagaccagtggcgcccgctgcaccagtccc
cggcgactggcaaacaaaagaattggacagatcaaaagcaagaaattccgttgttcagct
aaagaacagtatttcattccaggtacagaagattatcgatcaaaattaagtggggactgc
tttgccgatttggcttgtcctgaaaagtgccgctgcgaagggaccacagtggactgctcc
aatcaaaaactcaccaagatcccagaccacattccccagtacactgcagagctgcgcctc
aacaataatgaatttacagttttggaagctacagggatcttcaagaaacttcctcagtta
cgtaaaataaactttagcaacaataagatcacagacattgaagagggagcgtttgaaggc
gcatctggcgtgaatgaaatacttctcacgagtaatcgtttggaaaatgttcagcataag
atgttcaagggcttggaaagcctcaagacgttgatgttgagaagtaatcgcataagctgt
gtagggaatgacagtttcataggactcagctctgtgcgtttgctttctttatatgataat
cagattactaccattgcaccaggagcttttgatactctccattctttatctactctaaac
ctcttggccaatcctttcaactgtaactgctacctggcttggttgggagaatggctcaga
aagaaaagaattgtaacaggaaatcctcgctgtcagaagccctatttcctcaaagaaatc
cccatccaggatgtggccattcaggacttcacttgtgacgacggaaatgatgacaacagc
tgttccccactctctcgctgtcctgcggagtgtacctgcttggacacagtggttcgatgt
agcaacaaagccttgaagatcttgcccaaaggaattccaagagacgtcactgaactgtat
ctggatgggaaccagtttaccctggttcctaaggaactctctaactacaaacatttaaca
cttatagacttaagtaacaacagaataagcactctctctaatcagagcttcagcaacatg
acccagctcctcaccttaattcttagttacaaccgtttgagatgtattcctcctcgaacc
tttgatggactgaagtctcttcgattactttctttacatggaaatgacatttctgttgtg
cctgaaggtgctttcaatgatcttgctgcattatcacacctagcaattggagccaaccct
ctttactgtgattgtaacatgcagtggttatccgactgggtaaagtcggaatacaaagag
ccgggaattgcgcgctgtgctggtcctggagaaatggcagataaactacttctcacaact
ccctccaaaaaatttacatgtcaaggtcctgtggatgtcaatattctagctaaatgtaat
ccctgcttatcaaatccatgtaaaaatgatggcacctgtaacaacgatccagttgacttt
tatcgctgcacctgtccatatggtttcaaggggcaggactgtgatgttccaattcatgca
tgcatcagcaacccatgtaaacatggaggaacttgccacttaaaagaaggagaaaaggat
ggattctggtgtatttgcgctgatggatttgaaggagaaaattgtgaaatcaatgttgat
gactgtgaagataatgactgtgaaaataactctacatgtgtcgatggaattaataactac
acatgtctttgcccgcctgagtacacaggagagttgtgtgaggagaaactggacttctgc
gcccaggacttgaacccctgccagcatgactccaagtgcatcctgacgccaaagggatac
aaatgtgactgcaccccaggatatgtaggagaacactgtgacatcgacttcgatgactgc
caagatcacaagtgtaagaacggagcccactgcaccgatgcggtgaacggttatacctgc
acctgtcctgaaggctacagtggcttgttttgtgagttttctccacccatggttctccct
cgtaccagcccctgtgataattttgactgtcagaatggagctcaatgcatcatcaggatc
aatgagccaatatgccagtgtttgcctggctaccagggagaaaagtgtgaaaaactggtc
agtgtgaattttgtaaacaaagagtcttatcttcagatcccttccgccaaggtccggcct
caaacaaacatcactcttcagattgccacagatgaagacagtggaatcctcctgtataag
ggtgataaagaccatatcgctgtagaactctaccgaggacgagttcgtgccagctatgac
accggctcccacccagcttctgccatttacagtgtggagacaatcaatgacggaaatttt
cacattgtggaactactcgccctggatcaaagtctctccctctcagtggacggagggagc
cccaaaatcattaccaacttgtcaaagcagtccactctgaattttgactcccctctctat
gttggaggcatgcccgggaagaacaacgtggccgcagctctgcgccaggcccctgggcag
aatggcaccagcttccacggttgcatccggaacctttacatcaacagcgaacttcaggac
ttccggaaggtgcccatgcagactggcatcctgcccggctgtgaaccatgccacaagaag
gtgtgtgcccacggcacatgccagcccagcagccaagccggcttcacctgtgagtgcgag
gaaggatggacagggccactctgcgatcagaggaccaatgacccctgtctcggaaataaa
tgcgtccatggcacctgcctgcccatcaatgcgttctcctacagctgcaagtgcctagag
ggccatgggggcgtcctctgtgatgaagaggaggatctgtttaacccatgccaggcgatc
aagtgcaagcatgggaaatgcaggctttcaggactggggcagccctactgtgaatgcagc
agcggatacaccggggacagctgtgatcgagaaatctcttgtcgaggggaacggataaga
gattattaccaaaagcagcagggctacgctgcttgccagacgaccaagaaggtgtctcgg
ttggaatgcagagggggctgtgcaggtgggcagtgctgcggacctctgaggagcaagcga
aggaaatactctttcgaatgcactgatgggtcctcgtttgtggacgaggtggagaaggtg
gtaaagtgtggctgtacccgctgcgcctcctaa
DBGET
integrated database retrieval system
