Cervus canadensis (wapiti): 122422602
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Entry
122422602 CDS
T07554
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccad03041
]
122422602 (DDX43)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122422602 (DDX43)
Spliceosome [BR:
ccad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122422602 (DDX43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
KH-I_KHDC4-BBP
KH_2
ResIII
MobL
P-loop_SecA
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122422602
NCBI-ProteinID:
XP_043294977
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All DBs
Position
20:complement(23035352..23051192)
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AA seq
643 aa
AA seq
DB search
MSRPETGANASSWVAASRQDEALPQAPNTRPAEELSQGAGRGQRTCAGGGRRGSLGLQQP
EGTGIREPPLSFKLKNDCVGAVIGRGGSNIKEIQSSTYTKIQIIRGYPEAEVRIFGTKAM
QSKAKTVIDDLVKKQEEYNTEPKLDVAAVQLSDGKDTIKDVSGEQKLIDWDKLRENILKW
NEKKWADLPPVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDDLKDGEKRPLPNPTCNF
EDAFHCYPEVMRNLQKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIH
IASQPVARNGPGMLVLTPTRELALQVDAECSEHSYGGLKSVCIYGGGDRDGQIKDLSKGV
DIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMT
SATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKRSHIQAFIESMSP
KDKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVRILIATDL
ASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRNDWKIAGELINIL
ERANQSVPEDLVSMAERYKANKLKKETENKWGKPQGKPRKFYH
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggccggaaaccggcgccaacgcctcctcctgggtcgctgcttcccggcaggat
gaggcactgcctcaggctccgaatacgaggccggcggaggagctgagccaaggcgctgga
agaggccagaggacctgcgcgggtggaggccggaggggctccttgggcctccagcagcct
gagggcacgggtattcgagaaccgccgctctccttcaagctgaagaacgactgcgtgggc
gccgtgatcggtcgtggtgggtcaaacataaaagagatccagagctcaacatacacgaaa
atacagataataagagggtatcctgaagcagaagtaagaatctttggcaccaaggcaatg
cagagcaaagcaaaaacagtgatagatgatcttgttaaaaaacaagaagaatacaacaca
gaacccaaacttgatgttgctgctgtccaactttcggatggaaaagatacaataaaggat
gtttcaggagagcagaaattaattgattgggataaactccgagaaaacattttgaaatgg
aatgagaaaaagtgggcagatttgcctccagttaagaaaaacttttacatagagtcagaa
aaaacaagttcaatgtcacaagaacaagtagacaattggaggaaggaaaattataatata
atttgtgatgacttgaaagatggtgagaaacgtcctcttcctaaccctacttgtaatttt
gaggatgcatttcactgttaccctgaagttatgagaaatcttcaaaaggcaggttttcaa
aagccaacaccaattcagtcacaggcatggccaatcatcctacaaggaatagatctgata
ggagtagcccagactggaacagggaagacattgtcctacttaatgcctggatttattcat
attgcctcccaacctgtagccaggaatgggcctggcatgttagtcctcaccccgactcgc
gagttggctctgcaggtggatgccgagtgctctgaacactcatacggaggtcttaaaagt
gtttgtatatatggtggtggcgatagagatggacaaataaaagatttatcgaaaggtgta
gacattatcatcgccactcccggaagactccatgatctacagatgaataactttgtgtac
ctgaaaagcataacctacctggtattagatgaagctgacaaaatgctggatatgggattt
gaaccccagataatgaagattttattagatgtacgcccagacaggcagacagttatgaca
agcgcaacatggccatatgccgtccgtagacttgcacaatcttacttgaaagagcccatg
attgtgtatgttggtactttggatctagtcgctgtaagtaccgtgacacaaaatataatt
gtcaccacagaagatgagaaaagatcacatatccaagctttcatcgagagcatgtctccc
aaggacaaagtcataatatttgtcagccggaaagctgtggctgatcatttatcaagtgac
ctgggtatccggcgtatatcagtagagtctctgcatggcaatagagaacagagtgataga
gagagagcattaaaaagctttaaaacaggtaaagtgcgaatactgattgctactgattta
gcatctcgtggtcttgatgtccatgatgtaacacatgtctataattatgattttccccga
aacatcgaagaatatgttcacagagtgggacgtaccgggagagcagggaggaccggggta
tctattacccttatcactagaaatgattggaagattgctggtgaattaattaatattcta
gaaagagcaaatcagagtgtcccagaggatcttgtctcaatggctgagagatacaaagca
aataaactgaaaaaagaaacagaaaacaaatggggaaaaccccaaggaaaacccaggaag
ttttatcattaa
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