Cervus canadensis (wapiti): 122422677
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Entry
122422677 CDS
T07554
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04721
Synaptic vesicle cycle
ccad04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
122422677 (RIMS1)
04721 Synaptic vesicle cycle
122422677 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122422677 (RIMS1)
Membrane trafficking [BR:
ccad04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
122422677 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
122422677 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
122422677
NCBI-ProteinID:
XP_043295162
LinkDB
All DBs
Position
20:complement(24060818..24643572)
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AA seq
1694 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMPELPDLSHLTEEERNIILAVMDRQKEEEEKEEAMLKCVVRD
MVKPAACKAPRNVEHQPHQPPPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICH
KTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFF
GSGPQQPSQDGTLSDTATGAGSEAPREKKARLQERSRSQTPLSSAAASAPDQAAPGAQTD
RTKGAEPAPPAGGPEQKQASSRSRSEPPRDRKKTPGLAEQNGKGAPKGERKRAPRTSAPP
VEAPAEERERKERRESRRLEKGRSQDYSVVPEKREEGPAAEAEKQRKEEEYQTRYRSDPN
LARYPVQPPPEEQQMRMHARVSRARHERRHSDVALPRTEAAAGPEGRPGPRAPHAARGSP
PASPRAYSAERTAEARAPGAQPLADASPPAPRPGPGPAEAPEPRAPEPLRKQSRLDPGSA
VLVRKAKREKVETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKRRQMSVSSSEEEGVSTP
EYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVI
LNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNG
KPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMER
PSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPY
VKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEE
ESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHTHGESASKKLQRS
QRISDSDMSDYEVDDAIGVVPPVGYRSSARESKPSTLTVPEQQRTTHHRSRSVSPHRGDD
QGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHRDASRSPIDQRIRDVDSQCLSEQDSELL
MLPRAKRGRSAECLHTTRHLVRHYKTLPPKMPLLENCSHWDIYSSILPARTKTKTLHHEC
FHSRALRFTDEILVGDLQPSLDRARSASTNCLRPDASLHSPERERGRWPPSLDRRRPPSP
RIQIQHASPENDRHSRKSERSSIQNQTRKGTASDAERVLPPCLSRRGYAAARATDQPVLR
GKHPARSRSSEHPSVRTLCSMHHLAPGGSAPPSPLLTRTHRQASPTRSPPADAAFSSRRG
RQLPQVPVRSGSIEQEQEKYNSSTKASLVVEERTRQMKMKVHRFKQTTGSGSSQELDREQ
YSKYNVHTDQYRSCDNVSARSSDSDVSDVSAVSRTSSASRLSSTSFLSEQSERPRGRISS
FTPKMQGRRMGTSGRAITKSTSMSGEMYTLEHNDGSQSDTAVGTVGAGGKKRRSSLSAKV
VAIVSRRSRSTSQLSQTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYS
SEGNLIFPGVRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVI
RARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKV
LQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLTPLTRRASQ
SSLESSTGPPCIRS
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccggggtccccgcccgcccaccgtgcctcccccgatgccc
gagctgcccgacctgagccacctgaccgaggaggagaggaacatcatcctggcggtgatg
gaccggcagaaggaggaagaggagaaggaagaagccatgctcaagtgtgtggtcagggac
atggtgaagcctgctgcctgcaaagccccaagaaatgttgaacaccagccccaccagcct
ccaccgagattgcatcaacagtttgaaagctataaagaacaagtgaggaaaatcggggag
gaagcgcgacgttatcagggagagcacaaggatgatgccccgacctgcgggatttgccac
aagaccaaattcgcggacggctgtggccacctgtgttcctactgccgcaccaaattctgc
gcgcgctgcgggggccgcgtgtctctgcggtccaacaacgaggacaaagtggttatgtgg
gtatgcaatttgtgtcgaaagcaacaggaaatcttaaccaagtcaggggcatggttcttc
ggcagcggccctcagcagcccagtcaggacggaacgctcagcgacacggctacaggggcg
ggttccgaggcgcctagagagaagaaagcccggctccaagagcgctcgaggtcgcagacc
cccctgagcagcgccgcggcctctgcccccgaccaggctgcccccggcgcgcagacggac
aggaccaagggcgctgagcccgccccgccagccgggggccccgagcagaagcaggcatcc
tccaggtctagaagcgagcctcccagggacaggaagaagacgccagggctggccgagcag
aatggcaaaggcgccccaaagggcgagcgcaaacgcgcgcccaggacctcggcgcctccg
gtagaggcgcccgcggaagaacgggagcggaaggaaaggcgggaaagccgaaggctggag
aaaggccggtcccaggactactccgtcgtgccagagaaacgcgaggaaggcccggcggcg
gaagcggagaagcagcggaaggaggaggagtaccagacccggtaccgcagcgacccgaac
ctggcgcggtacccggtccagccgccgcccgaggagcagcagatgcgcatgcacgcgcgg
gtgtcccgcgcccggcacgagcggcgccacagcgacgtggccctgccgcgcaccgaggcg
gccgcggggcccgagggcaggcccggcccgcgcgcgccccacgccgcccggggctcgccg
cccgcctcgccgcgcgcctactcggccgagaggaccgcggaggcccgggcgccgggcgcc
cagccgctcgccgacgccagcccgccggcgccccggcccggcccaggcccggcggaggcc
ccggagcccagggccccggagccgctccggaagcagagccgcctggaccccggctcggcc
gtcctggtgcgcaaggccaagcgcgagaaggtggagaccatgctgcgcaacgactcgctc
agctccgaccagtccgagtcggtgaggccgtcgccgcccaagccgcaccgcgccaagagg
ggcggcaagcggcgccagatgtccgtgagcagctcggaagaagagggtgtgtccacgccg
gagtacacgagctgcgaggacgtggagctggagagcgagagcgtcagcgagaagggtgac
ttggattattactggctggatcccgccacgtggcatagccgggaaacatcgcctattagc
tcgcatcctgtaacgtggcagccttctaaagaaggggatcgattaattggacgtgttatt
cttaataagagaacaaccatgcccaaagaatcaggtgcattactgggtctgaaagttgtt
ggaggaaaaatgactgacttaggacgcctcggtgccttcatcaccaaagtaaagaagggt
agccttgcagatgtggttggacacttgagagcaggggatgaagttctagaatggaatggt
aaacccctgccgggagctacaaatgaagaagtttacaacattattttagaatcaaaatca
gagcctcaagttgaaattattgtttcaaggcctattggtgacattccaaggattcctgag
agctcccatccaccactggagtccagttctagttcctttgagtctcagaagatggaaagg
ccttccatttctgtaatttctcccacaagccctggagctctcaaagatgccccacaagta
ttaccaggacaactttctgtgaagctgtggtatgacaaggtgggccaccaactgattgtc
aatgttctgcaagctacagacctaccccctagagtagatgggcgtcccaggaatccctat
gtaaaaatgtattttcttccagatagaagtgataaaagtaaaaggagaaccaaaacggta
aagaaagtcctagaaccaaagtggaatcagacttttgtctattcgcacgtgcatcgtaga
gattttagagaacggatgttggaaataaccgtgtgggaccagcccagggtgcaggaggag
gagagtgagttccttggagagatcctcatagagttggaaacagcgcttctagatgacgag
ccacattggtataaacttcagactcatgacgaatcttcactacctctgcctcagccatcg
cctttcatgccgcggcgacacacccacggcgaaagcgccagcaagaagctgcaaaggtcc
cagcgaatcagtgacagtgacatgtcagactatgaggttgatgatgcgatcggagtggtc
cctccagtaggttataggtctagcgctcgagaaagcaaaccttcaacattaaccgtgcca
gagcagcagagaacaactcatcaccgctcacggtcggtgtctcctcatcgcggcgatgat
caggggaggccacggtcacgtttaccaaatgtgccattacagaggagtttagatgaaatt
catccaacaagaagatcacgttctccaaccagacaccgtgatgcctcccgaagcccaatt
gatcagagaatcagagatgtggatagtcagtgtttatcagaacaagacagcgagcttctc
atgcttcccagagcaaaacgaggacggagcgcagaatgcctgcacaccaccagacatctt
gttaggcactataaaacattaccgcctaagatgcccttattagagaactgttctcactgg
gatatttacagctcaatcctgcctgcacgtaccaaaaccaaaacccttcaccatgaatgc
tttcactcgagagcactgaggtttactgatgagattctggttggtgacctgcagccctcc
cttgacagggcgaggagtgctagtaccaactgcttgagaccagatgctagtttgcattca
ccagaacgagaaaggggtagatggcccccctccctagataggagacggcctcctagcccc
aggattcaaatccagcatgcgtctccggagaatgacaggcactccagaaagtctgaaaga
tctagcatccaaaaccagactaggaaaggcactgcctctgacgcagaaagggttctccca
ccatgtctttctagaaggggatacgcagccgcgagagcgactgatcagccagtccttagg
gggaaacatcccgctcgctcccgctcgagcgagcaccctagtgtcagaacactgtgctct
atgcaccaccttgcccccggagggtccgcgccaccttctccgctcctgacaaggacgcac
cggcaggcgagccccacccggtccccgcccgcggacgccgccttcagcagccgccggggc
aggcagctcccgcaggtgcccgtgcgaagcggcagcatagaacaagaacaagaaaaatat
aactcatccacaaaagcaagcttagtagtggaggagcgaacgagacagatgaaaatgaaa
gtgcatcgatttaagcagacaacagggtctggttctagtcaagaacttgatcgcgagcaa
tattccaagtataacgtacacacagatcagtacagaagctgcgacaacgtctccgcccgg
tcctcagacagcgatgtcagcgacgtgtctgccgtgtcccgaaccagcagcgcctcccgc
ctcagcagcaccagcttcctgtccgagcagtctgagcggcctcggggcaggatcagttca
tttacccctaaaatgcaaggcagacggatggggacttccggaagagccatcaccaagagc
acaagcatgagcggagagatgtacacactggagcataatgatggcagccagtcggacaca
gctgtgggcaccgtcggagcaggtgggaagaagaggaggtccagcctgagtgccaaagtg
gttgccatagtgtcgcgaaggagcagaagcacgtcccagctgagccaaacagagtcaggc
cacaagaagttgaaaagcaccatccagagaagcacggagacaggaatggcagctgagatg
aggaagatggtgaggcagccaagccgggagtccacagatggcagcatcaacagctacagc
tccgaggggaatttaatatttcctggagtgagactaggcgcagatagtcaattcagtgat
tttcttgatggattgggaccagcccagcttgttggccgccagacccttgctacccctgca
atgggtgacatacagattggaatggaggataaaaagggccagttagaagttgaagtgatt
agagcacgaagcctcacgcagaaacccggctccaaatccacacctgctccttatgtcaaa
gtgtatcttttggagaatggggcctgcatagccaagaagaagacaagaattgcacgaaag
acccttgaccctttgtatcaacagtccctggtttttgatgaaagtccacagggtaaagtc
cttcaggtgattgtctggggggactacggcaggatggaccacaaatgcttcatgggggtg
gctcagatcttgttggaggaactcgatctttccagcatggtcatcggctggtacaagctg
ttcccaccgtcatcactggttgaccccacgctcacccctctcacccgccgggcttcccag
tcatctctggaaagttccactgggcccccctgcatccggtcctaa
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integrated database retrieval system
