Cervus canadensis (wapiti): 122422918
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Entry
122422918 CDS
T07554
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccad03009
]
122422918 (DDX54)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122422918 (DDX54)
Ribosome biogenesis [BR:
ccad03009
]
Eukaryotic type
Pre-60S particles
Helicases
122422918 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
122422918
NCBI-ProteinID:
XP_043295632
LinkDB
All DBs
Position
1:118790700..118808341
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AA seq
874 aa
AA seq
DB search
MAAGTRPAAAPRSRANMAQWKKKKGLRKRRGAASQSRSSDSEDGEFEIQAEDDARAQKLA
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPMILDGKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDSKLNEQLKTSFFLVREDAKAAVLLHLLRNVVRPQDQTVVFVATKHHAEYLSELLAT
QGVSCAHVYSALDQTARKINLARFTHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLARPPEEPSAGTESGDGV
LGRVPQGVVDDEDCGLRTSLEASLELRGLSRVADNAQQQYVRSRPAPSPESIKRAKELDL
AGLGLHPLFSSRFQQEELQRLRLVDSIRNYRSRATIFEINASSRDLSSQVMRAKREKDRK
AIASFQQGRQERQEGLAPSLPAPQEEQAEKEEAAGESVEDVFTEVVSRKRQQPGPHWGAK
RRREEARQRDQAFYIPYRPKDFDSERGLSVGGDGGAFEQQVAGAVLDLMGDEAQSLTRGR
QQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSEEEGA
SDRRGPERRGGKRGRGQGASQPRTPGTPTGRVRSELKTKQQILKQRRRAQKMRFLQRGGL
KQLSARNRRRAQELQQGAFGRGAPSKKGKMRKRM
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggcacgcgcccggcggccgcaccgcggtccagagctaacatggcccagtgg
aagaagaagaaggggctccggaagcgccggggtgcggcgtcccagtcccgcagcagcgac
tcggaggacggcgagtttgagatccaggcagaagatgacgcccgggcccagaagctggcg
cctggcagacccctacccactttccccacctcggaatgcacctcagacgtggagccagac
acgcgggagatggtgcgagctcagaacaagaagaagaagaaatcaggaggcttccagtcc
atgggcctgagctacccagtcttcaaaggcatcatgaagaagggctacaaggtgccgaca
cccatccagaggaagaccatcccgatgatcctggacggcaaggacgtggtggccatggcc
cggacgggcagcggcaagaccgcctgcttcctcatccccatgttcgagcggctcaagacc
cgcagtgcccagactggggcccgtgccctcatcctttcacccacccgagaactggccctg
cagaccatgaagttcaccaaggagctcggcaagttcactggcctcaagactgccctgatc
ctgggtggggacaagatggaagaccaatttgcagccttgcatgaaaatcctgacataatc
atcgctacccctgggcgcttggtacatgtggctgtggagatgaacctgaagctgcagagt
gtggagtacgtggtattcgatgaggccgacaggctctttgaaatgggcttcgcagagcag
ctccaggaaatcatcggccgcctcccggggggccaccagactgtcctgttctctgccacg
ctgcccaagctgctggtggagttcgcccgagctggcctgacggagcccgtgctcatccgg
ttagacgtggactctaaactcaacgagcagctgaagacctccttcttcctggtgcgggag
gacgccaaggccgcggtgctgctccacctgctgcgcaacgtggtgcggccccaggaccag
acggtcgtgtttgtggccaccaagcaccacgcggaatatctcagcgagctgctggcgacc
cagggggtgagctgtgcccacgtctacagtgccctggaccagacggcccgcaagatcaac
ctggccaggttcacacacggcaagtgctcggccctcatcgtaactgacctggccgcccgg
ggcctggacatcccactgctggacaacgtcatcaactacagcttccccgccaagggcaag
ctcttcctgcaccgcgtaggtcgcgtggcccgggccggccgaagcggcacggcctactcc
ttggtggcccccgacgaggtcccctacctgctggacctacacctgttcctgggccgtgct
ctgacccttgcccgtccccctgaggagccctcagcaggcacggaaagcggggatggtgta
ctgggccgggtgccgcagggcgtggtggacgacgaggactgcggcctgcggaccagcctg
gaggcgtcgctggagctgcggggcctgagccgcgtggccgacaacgcccagcagcagtat
gtgcgctcacggccggcaccctcgcccgagtccatcaagagggccaaggagctggacctt
gccgggctgggcctgcaccccctcttcagctctcgcttccagcaggaggagctgcagcgg
ctcaggctggtggacagcatcaggaactaccgctcccgggccaccatctttgagatcaac
gcctccagccgcgacctgagcagccaggtgatgcgcgccaagcgggagaaggaccgcaaa
gccatcgccagcttccagcagggacggcaggagcggcaggagggcctggccccgagcctc
ccagcaccgcaggaggagcaggctgagaaggaggaggcggcgggagagagtgtagaggac
gtcttcacagaagttgtcagccggaagcggcagcagcccggaccccactggggagccaag
aggcggagggaggaggcgcggcagcgggaccaggcgttctacatcccctaccggcccaag
gacttcgacagcgagcggggcctgagcgtcggcggggatgggggcgcctttgagcagcag
gtggctggcgcagtgctggacctgatgggagacgaagcccagagcctgaccaggggccgg
cagcagctcaagtgggaccggaagaagaagcggtttgtgggacagtcaggacaagaggac
aagaaaaagatcaagactgagagtggccgctacatcagcagctcctacaagcgggacctc
taccaaaagtggaaacagaaacagaaaatcgatgatcgtgactcagaagaagaaggagct
tctgaccgtcgcggcccagagcgaagaggtgggaagcgtggccgagggcaaggtgcatcc
cagccccgcacccctggcacccccacaggccgcgtgcgctcagagctcaagaccaagcag
cagatcctgaagcagcggcgccgagcccagaagatgcgcttcctgcagcgtgggggcctg
aagcagctctctgcccgcaaccggcgccgcgcgcaggagctgcagcagggtgccttcggc
cggggcgccccttccaagaagggcaagatgaggaagaggatgtaa
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