Cervus canadensis (wapiti): 122423809
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Entry
122423809 CDS
T07554
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04082
Neuroactive ligand signaling
ccad04721
Synaptic vesicle cycle
ccad04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122423809 (SLC6A12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
122423809 (SLC6A12)
04721 Synaptic vesicle cycle
122423809 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccad02000
]
122423809 (SLC6A12)
Transporters [BR:
ccad02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122423809 (SLC6A12)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
122423809
NCBI-ProteinID:
XP_043297146
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Position
21:12415417..12433155
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AA seq
617 aa
AA seq
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MAADDRKAAAPKEGLPVVPWTPEEGPRPDQEAREQVKDRGQWNNKMEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVALGQYTSQGSVTAWRKICPLLQG
IGLASVVIEAYLNIYYIIILAWALFYLFSSFTSELPWTTCAHSWNTEHCMDFLNHSAAGA
TGPSENVTSPVMEFWERRVLSISPGIQHLGGLRWELALCLLLAWVVCYFCIWKGVKITGK
VVYFTATFPYLMLVILLVRGVTLPGAYEGIIYYLKPDLLRLKDPQVWMDAGTQIFFSFAI
CQGCLTALGSYNKYRNNCYRDSIALCFLNSGTSFVAGFVVFSILGFMSREQGVPISEVAE
SGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCMECLVTASMDMFPRQLRR
SGRRELLILAIAVTCCLIGLFLVTEGGMYLFQLFDYYACSGTCLLFLSVFEVICIGWVYG
ADRFYDNIEDMIGYRPWPLVKISWLFLTPGLCLATFFFSLSKYTPLKYNNVYVYPAWGYF
IGWFLAGSSMGCVPLFIIVTLLKTRGSFKKRLRQLVTPDPSLPQPKRHLCLDGGSGRDCG
PAPLKEGLMAGEKETHL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacgacagaaaagcggcagctcccaaggaggggcttccggtggttccctgg
acccctgaggagggcccaaggccagaccaggaagccagggagcaggtgaaggatcgaggc
cagtggaacaacaagatggagttcgtgctgtccgtggccggggagatcatcgggctgggc
aacgtctggaggttcccctacctctgctacaaaaacgggggaggagcgttcttcatcccc
tacttcatcttctttttctcctgcggcatcccggtgttcttcctggaggtggcgctgggt
cagtacaccagccagggcagtgtcacagcctggcggaagatctgccccctcctccagggc
attgggctggcgtccgtggtcatcgaggcctatctgaacatctactacatcatcatcctg
gcctgggccctcttctacctgttcagctccttcacctccgagctgccctggaccacctgc
gcccactcctggaacacagagcattgcatggacttcctgaaccactccgcagccggcgcc
acgggcccgtccgagaacgtcacgtcccccgtcatggaattctgggagagacgtgttctg
agcatcagccctggcatccagcacctgggcggcctgcgctgggagctggccctgtgtctc
ctgcttgcctgggtcgtctgctacttctgcatctggaagggagtcaagatcacgggcaag
gttgtctacttcacagccacatttccctacctgatgctggtcattctgttggttcgaggt
gtcaccctgcccggagcctacgagggcatcatctactacctgaaaccagatttgcttcgg
ctcaaggacccccaggtgtggatggacgcgggcacccagatcttcttctccttcgccatc
tgccaggggtgcctgacggccctgggcagctacaacaagtaccgcaacaactgctacagg
gacagcatcgcgctctgcttcctcaacagcggcaccagcttcgtggccgggtttgtggtc
ttctccatcctgggcttcatgtcccgggagcagggcgtgcccatctctgaggtggccgag
tcaggccccggcctggccttcatcgccttccccaaggccgtgaccatgatgcccctgtcc
cagctgtggtcctgcctcttcttcatcatgcttatcttcctcgggctggacagccagttt
gtctgtatggagtgcctggtgacggcctccatggacatgttccccaggcagctccggaga
agcgggcggcgggagctcctgatccttgccatcgcggtcacgtgctgcctgatcgggctc
ttcctggtcactgagggtgggatgtacctctttcagctgtttgattactacgcctgcagc
ggcacgtgcctgctcttcctttccgtgtttgaggtgatctgcatcggctgggtgtatggg
gccgaccgtttctatgacaacattgaagacatgattggctaccggccatggcccctggtg
aagatctcctggctcttcctgacccctggcctttgcctggccacatttttcttctccttg
agcaagtacacacctctcaaatacaacaacgtctatgtgtacccggcctggggatacttc
atcggctggttcctggctggctcctccatgggctgtgtcccactcttcatcatcgtcacc
ctcttgaagacccggggttccttcaagaagcgcctgcggcagctcgtcacccctgacccc
agcctgccgcagcccaagagacacctgtgtctggatggtggcagtggccgggactgcggg
cctgccccacttaaggagggcctcatggctggggagaaggagacgcatttgtag
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