Cervus canadensis (wapiti): 122423823
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Entry
122423823 CDS
T07554
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03440
Homologous recombination
ccad04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122423823
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122423823
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccad01002
]
122423823
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122423823
03036 Chromosome and associated proteins [BR:
ccad03036
]
122423823
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122423823
Peptidases and inhibitors [BR:
ccad01002
]
Metallo peptidases
Family M67
122423823
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122423823
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
122423823
BRISC complex
122423823
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
122423823
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
122423823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
APG6_N
TEDC1
UPF0172
REP_ORF2-G2P
Motif
Other DBs
NCBI-GeneID:
122423823
NCBI-ProteinID:
XP_043297183
LinkDB
All DBs
Position
21:23126530..23127360
Genome browser
AA seq
276 aa
AA seq
DB search
MAAQVVQAVQAVHLELDAFLVCLNHALSTEKEEVMGLCIGEFDTIRIVHIHSVIILRRSD
KRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYYSHPHITVWPSHVDVRAQAMYQM
MDQGFVGLIFACFIEDKNTKTGRVLYTCFQSIQAQRSSEYERIEIPIHIVPHVTIGKVCL
ESAVELPKILCQEEKDAYRRIHSLTHLDSVTKIHNGSVFTKNLCSQMSTVSGPLLQWLED
RLEQNQQHVQELQQEKEELLQELSSLEYSQRQNGEG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcaggtggtgcaggcagtgcaagcggtccatctggagttggatgccttcctc
gtgtgtctcaaccacgctctgagcacggagaaggaagaggtgatggggctgtgcattggg
gagtttgacaccatcagaattgttcacattcattctgtcatcatcctgcgacgttctgat
aagaggaaggatcgcgtggaaatttctccagagcagctgtctgcggcctcaacagaggca
gagaggttggctgaactgacgggtcgccccatgagagttgtgggttggtactactcccat
ccccatataactgtttggccttcacatgttgatgtccgcgcacaagccatgtaccagatg
atggatcaaggctttgtaggacttatatttgcctgcttcatagaagataaaaatacaaag
actggacgggtactctatacttgctttcaatccatacaggcccaaaggagctcagagtat
gagagaattgaaatcccaattcatattgtacctcatgtaaccattgggaaagtatgcctt
gagtcagcagttgagctgcccaagatcctgtgccaagaagaaaaagatgcatataggagg
atccacagccttacacatcttgactcagtaaccaagatccataatggctcagtgtttacc
aagaatctgtgtagtcagatgtcaacagtcagcggacctctactacagtggttggaggac
agactggagcaaaaccaacagcatgtccaggagctgcaacaagaaaaggaagagcttctg
caagaactttcttctctagaatacagccagagacagaacggggaaggatga
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