Cervus canadensis (wapiti): 122423994
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Entry
122423994 CDS
T07554
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
122423994 (SHANK3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
PDZ_6
Ank_3
SH3_9
Ank_5
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
122423994
NCBI-ProteinID:
XP_043297521
LinkDB
All DBs
Position
21:complement(79057..130891)
Genome browser
AA seq
1808 aa
AA seq
DB search
MQLSRAAAAAAAAPAEPSEPLSPAPAPAPAPPGPLPRSAADGAPVGGRGGPGRGEEPRGA
QLLAASGPGPGAGMDGPGASAVIVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCALNHSL
QDALNYGLFQPPSRGRAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQF
AKLHTKANLKKFMEYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDDATDLLK
VLRNGGAHLDFRTRDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSRGLTPLYHSALGG
GDALCCELLLHDHAQLGTTDENGWQEVHQACRFGHVQHLEHLLFYGADMGAQNASGNTAL
HICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPFR
ETPSYAKRRRLAGPSALASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLLLQRLQE
EKDRDRDGDQQNDGSPATGRGSQSKISPSGPGGPGGPGPAPGPGPAPPAPPAPPPRGPKR
KLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCV
EEVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLSAHSDYVIDDKVAVLQKRDHEGFGFV
LRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQ
VVALIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELAS
IRRRKGEKLDEILAAAAEPALRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPG
PEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRGIPPPPQTAPPPPP
APYYFDSGPPPAFSPPPPPGRAYDTVRSSFKPGLEARLGAGAPGLYDSGAALGPLPYPER
QKRARSMIILQDSAPEAADASRPPPAATPPERPKRRPRPPGPDSPYANLGAFSASLFAPS
KPQRRKSPLVKQLQVEDAQERAALAVGSPGPGVGSFAREPSPTHRGPRPSGLDYGPGDGP
GLAFGGPAPSKDRRLEERRRSTVFLSVGAIEGSAPTADMPSLQPSRSIDERLLGTGAATT
TGRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQA
PSRSPTPVHSPDTDRPGPLFVDVQARDSERGPLASPAFSPRSPAWVPVPARREPEKVPRE
ERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPSGLGAEEQRPGTPELAPAPTQS
AVVTEPLPSPRAQPPGSAPADPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARI
GLVPPPEEFANGVLLATPLPGPGPSPTTVPGPASGKPSTEPPPAPESAADSGVEEADTRS
SSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGK
GPVTFRDPLLKQSSDSELMAQQHHAATAGLASAAGPARPRYLFQRRSKLWGDPVESRGLP
GPEDDKPTVITELSSRLQQLNKDTRSLGEEPAGGLGGLLDPAKKSPIAAARLFSSLGELS
TISAQQRSPGGPGGGPSYPVRPGGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRPFGL
TPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPAPGPGPGAPSPRRPFQQK
PLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIER
ALRQLDGS
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagccgcgccgccgccgccgccgccgccgcccctgcggagccctcggagccg
ctgtccccggcgccggccccggccccggctccccccggccccctcccgcgcagcgcggcc
gacggggctccggtggggggccggggggggccggggcgcggcgaggagccccggggcgcc
cagctcctggccgctagcggccccggcccgggcgcggggatggacggccccggggccagc
gccgtgatcgtgcgcgtcggcatcccagacctgcagcagacgaagtgcctgcgcctggac
ccggccgcgcccgtttgggccgccaagcagcgcgtgctctgcgccctcaaccacagcctc
caggacgcgctcaactacgggctcttccagccgccctctcggggccgcgccggcaagttc
ctggacgaggagaggcttctgcaggaatacccgcccaacctagacacgcccctgccctac
ctggagtttcgatacaagaggcgagtttatgcccagaacctcattgatgataagcagttt
gcaaagcttcacacaaaggcgaacctgaagaagtttatggaatacgtccagctgcacagc
acagacaaggtggcccgcctgctggacaaggggctggaccccaatttccacgatcctgac
tcaggagagtgtccgctgagccttgccgcccagttggacgacgccaccgacctgctgaag
gtgctgaggaacggcggcgctcacctggacttccgcacgcgagacgggctcacggccgtg
cactgtgccacgcgccagcggaacgcggctgccttgacgaccctgctggacctgggcgcc
tcaccggactacaaggacagccgcggtctgacgcccttgtaccacagcgccctgggcggg
ggggacgccctctgctgcgagctgctcctgcacgaccatgctcagctggggaccaccgac
gagaacggctggcaggaagtccaccaggcctgccgcttcgggcacgtgcagcacctggag
cacctgctgttctacggagctgacatgggggctcagaatgcctctgggaacacagccctg
cacatctgcgccctctacaaccaggagagctgtgcccgtgtcctgcttttccgcggagcc
aacaaggatgtccgcaattacaacagccagacagccttccaggtggccatcatagcgggg
aactttgagctcgcggaggtcatcaagacccacaaagattcggacgttgtgccattcagg
gaaacccccagctacgcgaagcggcggcggctggccggcccgagcgccctggcctcgcct
cggcccctgcagcgctcagccagtgacatcaacctgaagggcgaggtgcagccggcagct
tctcctggaccttcactgagaagcctcccccaccagctgctgctccagcgactgcaggag
gagaaagaccgggaccgggatggggaccagcagaatgacggcagccctgccacaggcagg
ggcagccagagcaagatcagcccgagcgggcccggcggcccgggcggccccggccccgcg
cccggccccggcccggcgccccccgcgccccccgcgccgccgccccggggcccgaagcgg
aaactttacagcgcagtccccggccgcaagttcatcgccgtgaaggcgcacagcccgcag
ggcgagggcgagatcccgctgcaccgcggcgaggccgtgaaggtgctcagcattggggag
ggcggtttttgggaggggaccgtgaaaggccgcacgggctggttcccggctgactgcgtg
gaggaggtgcagatgagacagtatgacacccggcatgaaacccgggaggaccggacaaag
cgacttttccgccactacacggtgggctcctacgacagcctctctgcacacagcgactat
gtcattgacgacaaggtggctgtcctgcagaaacgggaccacgaaggctttggttttgtg
ctccggggggccaaagcagagactcccatcgaggagttcacgcccacgccggccttccca
gcgctccaatacctcgagtcggtggatgtggagggcgtggcctggagggcagggctgcgc
acgggagacttcctcatcgaggtgaatggggtgaacgtggtgaaagtcggacacaagcag
gtggtggctctgatccgccagggcgggaaccgcctcgtcatgaaggtggtgtcagtgaca
aggaagccggaagaggacggggctcgacgcagagccccgccgccccctaagagagccccc
agcacaacgctgaccctgcgctccaagtccatgacagcagagcttgaggagcttgcctcc
attcggagaaggaaaggggagaagctggacgagatcctggcggccgccgcggaaccggca
ctgaggccggacatcgcggatgcggactcgagagcggccaccgtcaaacagcggcccact
agtcggaggatcacccctgctgagatcagttcactgtttgagcgccagggcctcccaggc
ccggagaagctgccaggctccctgcggaaggggattccacggaccaagtctgtaggggag
gacgagaagctggcgtccctgctggaggggcgcttcccgaggagcacgtcgatgcaggac
acggtgcgcgagggccgtggcatcccgccccctccgcagaccgcgccgccgccccctccc
gccccctactactttgactctgggccgccccctgccttctcgccaccgccgcctcccggc
cgcgcctacgacaccgtgcgctccagcttcaaacccggcctggaggcacgcctgggcgcg
ggcgccccgggcctgtatgattcaggcgcggccctgggtccgctgccttacccggagcgg
cagaagcgcgcgcgctccatgatcatcctgcaggactcggcgcccgaggcggccgacgcc
tctcggcccccgccagcggccaccccgccggaacgccccaagcggcggccacggccgccg
ggccccgacagcccctacgccaacctgggcgccttcagcgccagcctctttgcgccgtcg
aaacctcagcgccgcaagagccctctggtgaagcagctgcaggtggaggatgcgcaggag
cgcgcggccctggccgtgggcagccccggcccgggcgtcggcagcttcgccagggagccc
tccccgacgcaccgcgggccgcggcccagcggtctcgactacggccccggagacggcccc
gggctggcgtttggcggcccggccccaagcaaggaccggcggctggaggagcggcggcgc
tccaccgtgttcctgtctgtgggtgccatcgagggcagcgctccgaccgcggacatgccc
tccctgcagccctcccgctccatcgatgagcgccttctgggaaccggcgccgccaccacc
accggccgtgacctgctgctgccctccccagtttctgctctgaagccattggttagcggc
ccaagccttgggccttccggctccactttcatccacccgctcaccggcaaacctctggac
cccagctcgcctttggccctggccctggcggctcgcgagcgggctctggcgtcccaggcg
ccctcccggtcccctacacctgtgcacagccccgacaccgaccggcccgggcccttgttt
gtagatgtgcaggcccgggactcggagcgagggcctctggcctcgccagccttctccccc
aggagcccagcctgggttcctgtgcctgcgcggagggagcccgagaaggtgccccgggag
gagcgcaagtccccggaggacaagaaatccatgatcctcagcgtcctggacacgtccctg
cagcggcccgccggcctcatcgtcgtgcacgccaccagcaacgggcaggagcccagtggg
ctgggggccgaagagcagcgccctggcaccccggagctggccccggcccccacacagtcc
gctgtggtcacagagcccctgccgagcccccgggcccagccccccggcagtgcccccgct
gaccccgggcccggccagggcagctccgaggaggagccggagctggtattcgctgtgaac
ctgccgccagcccagctgtcctccagcgacgaggagaccagagaggagctggcccgcatc
ggacttgtgccgcctcccgaagagtttgccaacggggtcctgctggccacgccactcccc
ggcccaggcccctcgcccaccacggtgccaggcccggcctcagggaagccgagcaccgag
ccgccgcccgccccggagtccgcggcggattcgggggtagaggaggccgacacgcgcagc
tccagcgacccccacctggagaccacgagcaccatctccaccgtgtccagcatgtccacc
ctgagctcggagagtggggaactcacggacacccacacctccttcgctgacggacatact
tttctactcgagaagccaccagtgcctcccaagcccaagctcaagtccccgctggggaag
gggccggtgaccttcagggacccgctgctgaagcagtcctccgacagtgagctcatggct
cagcagcaccacgccgccaccgccgggctggcctctgctgccgggcctgctcgccctcgc
tacctcttccagagaaggtccaagctgtggggggaccccgtcgagagccgggggctccct
gggcccgaagacgacaagccaactgtgatcactgagctcagctcgcgcctgcagcagctg
aacaaagacacccgctccctgggggaggagccggccggcggcctgggcggcctgctggac
cccgccaagaagtctcccatcgcggcagctcggctcttcagcagcctcggtgagctgagc
accatctcagcgcagcagcgcagccccgggggcccgggcggcgggccctcctaccccgtg
cggccaggcggccgctaccctgtggcgcggcgcgccccgagcccggtgaagcccgcgtcg
ctggagcgggtggaggggctgggggcgggggcggggggcgcggggcggcccttcggcctc
acgccccccaccatcctcaagtcgtccagcctctccatcccccacgagccgaaggaggtg
cgctttgtggtgcgcagcgtgagcgcgcgcagccgctcgccctcgccttcgccgctgccc
tcgccagcgcccggcccgggccccggggcccccagcccccgccggcccttccagcaaaag
cccctgcaactctggagcaagttcgacgtgggcgactggctggagagcatccacttgggc
gagcaccgcgaccgcttcgaggaccacgagatcgagggcgcgcacctgccggcgctcacc
aaggacgacttcgtggagctgggcgtcacgcgcgtgggccaccgcatgaacatcgagcgc
gcgctcaggcagctggacggcagctga
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integrated database retrieval system
