Cervus canadensis (wapiti): 122424344
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Entry
122424344 CDS
T07554
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
122424344 (BHLHE40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122424344 (BHLHE40)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
122424344 (BHLHE40)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
122424344
NCBI-ProteinID:
XP_043298019
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Position
22:38107453..38113155
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AA seq
412 aa
AA seq
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MERIPSAQPPPTCLPKAPGLEPGDLPGMDFAHMYQVYKSRRGIKRSEESKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGDLSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGTSRKPSDPAPKAMDFKEKPSSLAKGSEGPGKNCVPVIQRTFAHSSGEQSGSDTD
TDSGYGGESEKGELRVEQPYFKSDHGRRFTMGERISAIKQESEEPPMKKSRMQLSDDEGP
FSSTDLISSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASAA
ALSSFMNPDKISAPMLMPQRLPSPLPAHPAIDSSALLQALKQIPPLNLETKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagcgcgcaaccgccccccacttgcctgcccaaagcgccaggactg
gagcccggagacctaccagggatggattttgcccatatgtaccaagtgtacaagtcgagg
cggggaataaagcggagcgaggagagcaaggagacctacaaactgccgcaccggctcatc
gagaaaaagagacgtgaccggattaacgagtgcatcgcccagctgaaggatctcctcccc
gaacatctcaaacttacaactttgggtcacttggaaaaagcagtggttcttgaacttacc
ttgaagcatgtgaaagcattaacaaacctaattgatcaacaacagcagaaaatcattgcc
ctgcagagtggtctgcaagctggtgatctgtcggggagaaatgtggaagcaggtcaagag
atgttctgctcaggtttccagacatgtgcccgggaggtgcttcagtacctggccaagcat
gagaacactcgggacctgaaatcttcgcagcttgtcacccacctccaccgtgtggtctcc
gagcttctacagggtggtacttccaggaagccatcagacccagcccccaaagcaatggac
ttcaaggagaaacccagctccctggccaaaggctccgaaggcccaggcaaaaactgtgtg
ccagtcatccagcgaactttcgcccactcgagcggcgagcagagtggcagtgacacggac
acagacagcggctacgggggagaatcggagaagggtgagctgcgtgtcgagcagccgtac
ttcaaaagcgatcatggacgcagattcaccatgggagaaaggatcagtgctattaagcaa
gaatccgaagaaccccccatgaaaaagagcagaatgcagctctccgatgatgaaggccct
ttcagtagcactgacctgatcagctccccgttcctgggcccacacccgcaccagcctccc
ttctgcctgcccttctatctgatcccaccgtcagcaactgcctacttgcccatgctggag
aagtgctggtaccccacgtctgtcccagtgttatacccgggcctcaacgcctctgccgca
gccctcagcagcttcatgaacccagacaagatctcggcccccatgctcatgccccagaga
ctcccatccccactgccggcccatcctgccatcgactcttctgccctgctccaagctctg
aagcagatcccccctttaaacttagaaaccaaagactaa
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