Cervus canadensis (wapiti): 122424458
Help
Entry
122424458 CDS
T07554
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccad03009
]
122424458 (DDX55)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122424458 (DDX55)
Ribosome biogenesis [BR:
ccad03009
]
Eukaryotic type
Pre-60S particles
Helicases
122424458 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
AAA_22
YbjM
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122424458
NCBI-ProteinID:
XP_043298183
LinkDB
All DBs
Position
1:126141971..126164124
Genome browser
AA seq
613 aa
AA seq
DB search
MSPGSSSVAERTMEHVTEGSWESLPVPLHPQVLSVLRELRFPYMTPVQSATIPLFMKNKD
VAAEAVTGSGKTLAFVIPIVEILLRREEKLKKSQVGAIIITPTRELAVQIEEVLSHFTKP
FPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGRLEDMFRRKAEGLDLASSVRSLEVL
VLDEADRLLDMGFETSINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEK
GVAASSTQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALE
ALVKGVKIMCIHGKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSN
ASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQNTTADLLPKLK
AMALADRAVFEKGMKAFVSYIQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRG
KQFPDFVPVDVNTDTIPFKDKIREKQRQKQLLEQQRKEKTENDGRRKFIKNKAWSKQKAK
KEKKKKLNEKRKREEGSDMEDEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTSGKRSTN
TADLEISDLEDDC
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgggtagtagctcggtggctgagcgcaccatggagcacgtgacggagggttcc
tgggagtcgctgccggtgccgctgcatccgcaggtgctgagtgtcttgcgggagctccgt
tttccgtacatgacgcccgtgcagtccgcaaccatccctctgttcatgaaaaacaaagac
gttgctgcagaagcggtcacaggtagtggcaaaaccctcgctttcgtcatccccattgtg
gaaattctcctgaggagggaagagaagttaaagaagagtcaggtgggcgccataatcatc
acacccacgcgagagctggctgttcagatagaggaggtcctgtctcatttcacgaagccc
ttcccacagtttagccagattctctggattggaggcaggaatcctggagaagatgttgcc
agatttaaggagcttggtgggaatatcatcgtggcaaccccaggccgcctggaggacatg
ttccgaaggaaggctgagggcctcgatctggccagcagcgtgaggtccctggaggtcctg
gtattggatgaagcagacaggcttctggacatgggttttgagacaagcataaatactatc
ctggagtttttgccaaagcagaggagaacgggccttttctcggccactcagacacaggaa
gtggagaacctggtgagagcaggcctgcggaaccctgtgcgcatctccgtgaaggagaag
ggcgtggcggccagcagcacccagaaaaccccttcccgcctggagaactactacatggtc
tgtaaggcagatgagaaatttaatcagttggtacattttcttcgaaatcataagcaggag
aaacatctggtcttcttcagcacctgcgcctgtgtggaatactacggaaaggctctggag
gccctggtgaagggtgtgaagataatgtgcattcatggaaagatgaaatacaagcgcaat
aagatcttcatggagttccgcaaattgcagagtgggattttagtgtgcactgatgtgatg
gcccgaggaatagatattcctgaagtaaactgggttttgcagtacgatcctcccagtaac
gccagcgccttcgtgcatcgctgtggccgcacagcccgcatcggccacggtggcagcgcg
ctcgtgtttctccttcccatggaagagtcgtacatcaacttccttgcaattaaccaaaaa
tgccccctgcaggagatgaaactccagaacaccacagctgacctccttccaaagctcaag
gccatggccctggccgacagagccgtgtttgagaagggcatgaaagctttcgtgtcatac
atccaggcttatgccaagcacgagtgcaacctcatcttcagattaaaggatcttgatttt
gctagtcttgctcgaggttttgccctgctgaggatgcccaagatgccagagctgagagga
aagcagtttccagattttgtgcctgtggatgtcaacacagataccattccatttaaagac
aaaatcagagaaaagcagaggcagaagcaattattggagcagcaaagaaaagagaaaaca
gaaaatgacgggagaagaaaattcataaaaaataaagcttggtcaaagcagaaggccaaa
aaggaaaagaagaaaaaactgaatgaaaaaaggaaaagggaagagggttctgatatggaa
gatgaagacatggaggaacttctgaatgacacaaggctcttgaaaaagtttaaaaaaggc
aaaattactgaagaagaatttgagaaggggctgttgacaagtggcaagagatcaacaaac
acagcagatttggagatctcagatttggaagatgattgctga
DBGET
integrated database retrieval system
