KEGG   Cervus canadensis (wapiti): 122424636
Entry
122424636         CDS       T07554                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03013  Nucleocytoplasmic transport
ccad04141  Protein processing in endoplasmic reticulum
ccad04150  mTOR signaling pathway
ccad05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122424636 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122424636 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    122424636 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122424636 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccad03019]
    122424636 (SEC13)
   04131 Membrane trafficking [BR:ccad04131]
    122424636 (SEC13)
Messenger RNA biogenesis [BR:ccad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122424636 (SEC13)
Membrane trafficking [BR:ccad04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    122424636 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    122424636 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    122424636 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd WD40_Gbeta EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st Beta-prop_EML NBCH_WD40
Other DBs
NCBI-GeneID: 122424636
NCBI-ProteinID: XP_043298603
LinkDB
Position
22:6227759..6271105
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHAGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGSTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSTSVTEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacactgtggacacttcccatgaggacatgattcacgatgcccag
atggactactacggcacccgcctggcaacctgctcgtcagacaggtccgtcaagatcttc
gacgtgcgcaacggggggcagatcctcgtcgccgacctcaggggccatgagggccccgtg
tggcaggtggcctgggcccaccccatgtatggcaatatactcgcatcctgctcctacgac
cggaaggtcatcatctggaaggaggagaacggcacgtgggagaagacacacgagcacgcg
ggacacgactcctcggtaaactccgtgtgctgggctccccacgactatggcctcatcctg
gcctgcggcagctcggatggggccatctccctgctgacgtacactgggctgggccagtgg
gaagtaaagaagatcaacaatgctcacactattggctgcaatgcggtcagctgggcgcct
gctgtcgtgcctgggagcctcatagaccagccatctgggcagaagcccaactacatcaag
aagtttgcgtcaggaggctgtgacaacctcatcaaactgtggaaggaggaggaggacggc
cagtggaaggaagagcagaagctggaggcccacagtgactgggtccgagatgtggcctgg
gccccctccatcggcctgcctaccagcaccattgccagctgctctcaggatggtcgagtg
ttcatttggacctgtgatgatgcctcaggcagtacatggtctcccaagctgctgcacaag
ttcaacgatgttgtatggcatgtcagctggtccatcacagccaacatcctggcggtctca
ggtggagacaataaggtgaccctgtggaaggagtcggtcgacgggcagtgggtgtgcatc
agtgacgtcaacaagggccagggatccgtgtccacgtctgtcacagagggacagcagaac
gagcagtga

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