Cervus canadensis (wapiti): 122424684
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Entry
122424684 CDS
T07554
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04064
NF-kappa B signaling pathway
ccad04622
RIG-I-like receptor signaling pathway
ccad05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
122424684
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122424684
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
122424684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122424684
Enzymes [BR:
ccad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122424684
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122424684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
TRAF3_RING
Sina_RING
EGF_integrin
RNA_binding
Motif
Other DBs
NCBI-GeneID:
122424684
NCBI-ProteinID:
XP_043298686
LinkDB
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Position
1:6669862..6680001
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AA seq
628 aa
AA seq
DB search
MVNNPASNTAPKGPLPSIHRAAKPLALLNMQRVSRPVQDQAPALQPTAKLSGPPQGQFLM
NDSSLCTLEDQVLCPVCLEVFRNPVTTACGHNFCMSCLQGFWDYQATVGEPLYCPQCRES
FPTRPRLCKNVILEEMVTCFTQAKGQTLGSSRSLAGPRDVPCDFCAPEQLKSVKSCLQCM
ASLCEKHLRSHFEDQVFHGHQLLEPVWDLKSRLCRKHRKLRRLYCRTEGCCVCGACLLEE
HKNHDTIPLEEERAQKEVEVRKVQANVENQMLIITSDSQKHRGQVAFLSKLIQTTREEVN
ACFSEIIQEIKQMQMKVLDFVEKEEAAALGKLGGSIQQSHNRLLKLEGDSIWLRSLLANR
SDQQFLQELPRLKHFPACMEPLMGTNCEEKQSFLQLPETLAELRTRLVDMGLSFINQLLL
KGIKMNSYEVLPPDVDRKTLLKCYCNLNFDPTTASEELFLFKETHSVLNLGILLEPFAAG
GPFPGFKQWPQVLCSRGLAEGRHYWEADVSNSWVCLGVTYRRSPPLGGRPRRNIVYLLGR
NPYSWCLEWDSLKFSVWHNNTQTVLHGGYHRTLGVALDCAAGCLSFYGVAGGVSLLYRFL
ASFLEPLYPAVMVSSGASVTLKQRPSEA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggttaataatccagcttccaacacagcacccaagggtcctcttccctccatccacagg
gcagccaagcctctggctctccttaacatgcagagagtttcacggccagtccaggaccaa
gccccagccctgcagcccacggccaagctctcgggacctccccaaggccagttcctgatg
aatgacagcagtctctgcacgctggaggaccaagtcctctgtcccgtttgcctggaggtg
ttccgcaacccggtcaccaccgcctgcgggcacaacttctgcatgagctgcctccagggt
ttctgggactaccaggccaccgtgggcgagcccctctactgcccccagtgccgggagagc
ttccccacgcggcctcgcctctgcaagaacgtcatcctggaggagatggtgacctgcttc
acccaggccaagggccagaccttggggtcctcacggagcctggccgggcccagggacgtg
ccctgcgacttctgcgcccccgagcagctcaagtccgtcaagtcgtgcctgcagtgcatg
gcctccctgtgcgagaagcacctgcgcagccacttcgaggaccaggtgttccacgggcac
cagctgctggagcccgtgtgggacctcaagagccggctgtgccggaagcaccgcaagctc
cggcggctgtactgccgcaccgagggctgctgcgtgtgcggggcctgcctgctggaggag
cacaagaaccacgacaccatcccgctggaggaggagcgggcgcagaaggaggtggaggtt
cggaaggtccaggccaacgtggagaaccagatgctgatcatcacctctgacagccagaag
caccggggccaggtggcttttctctcgaaattgatccagacaacccgggaagaggtgaac
gcctgcttctcagagatcatccaggagatcaaacagatgcagatgaaggtgctggatttc
gtggagaaagaggaggctgccgccctggggaagctgggtggctccatccagcagagtcac
aaccggctcctgaagctcgagggggacagcatctggctccgcagcctgctcgccaaccgc
agtgaccagcagtttctgcaggagttgcccaggctgaagcacttccctgcctgcatggaa
cccctcatgggtaccaactgtgaggagaagcagagcttcctccagttgccagagaccttg
gcggaactccggacccggctggtggacatgggtctcagcttcatcaaccagctcctcctg
aagggcattaagatgaactcctatgaggtgctgcccccagatgtggacaggaaaaccctt
ctcaagtgttactgcaacctgaacttcgaccccacgacggccagcgaggagctcttcctg
ttcaaggagacccactcggtgctgaacctgggcatcctcctggagcccttcgcggcgggc
gggcccttcccgggcttcaagcagtggccgcaggttctgtgctcgcggggcctggccgag
ggccgccactactgggaggccgacgtgtccaactcgtgggtgtgcctgggtgtcacctac
cgccgcagccccccgctcggcggccgcccgcgccgcaacatcgtctacctgctgggccgc
aacccctactcgtggtgcctggagtgggactcgctcaagttctccgtctggcacaacaac
acgcagacggtgctgcacggcggctaccaccgcacgctgggggtggcgctcgactgcgcg
gccggctgcctctccttctacggcgtggcgggcggcgtgagcctcctctaccgcttcctc
gcctccttcctggagccgctctaccccgccgtcatggtcagcagcggcgcctcggtcacg
ctcaagcagcgcccctccgaggcctag
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