Cervus canadensis (wapiti): 122424865
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Entry
122424865 CDS
T07554
Symbol
SLC6A1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04082
Neuroactive ligand signaling
ccad04721
Synaptic vesicle cycle
ccad04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122424865 (SLC6A1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
122424865 (SLC6A1)
04721 Synaptic vesicle cycle
122424865 (SLC6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccad02000
]
122424865 (SLC6A1)
Transporters [BR:
ccad02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122424865 (SLC6A1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
122424865
NCBI-ProteinID:
XP_043299047
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Position
22:complement(5526749..5568670)
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AA seq
599 aa
AA seq
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MATDGSKVADGQISTEVSEVPMANDKPKTLVVKVQKKAADLPDRDTWKGRFDFLMSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAP
MFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNSWNTDRCFSNYSVI
NTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVV
YFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGL
GSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASG
PGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRR
ELFIAAVCLVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRF
YDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGSYVFPKWGQGVGWLM
ALSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDIVRPENGPEQSQASGSASKEAYI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgacggcagcaaggtggccgacgggcagatctccacggaggtcagcgaggtc
cccatggccaacgacaagcccaaaaccctggtggtcaaggtgcagaaaaaggcggcagac
cttccggaccgggacacgtggaagggccgctttgacttcctcatgtcctgcgtgggctac
gccatcggcctgggcaacgtctggaggttcccgtatctctgcgggaaaaacggtggtggg
gccttcctgatcccctacttcctgacactcatcttcgcgggggtccccctcttcctgttg
gagtgctccctgggccagtacacatccatcgggggcctgggggtgtggaagctggccccc
atgttcaagggtgtgggtcttgccgctgctgtgctgtccttctggctgaacatctactac
atcgtcatcatctcctgggccatctactacctgtacaactccttcaccacgacgctgccg
tggaaacagtgtgacaactcctggaacacagaccgctgcttctccaactatagcgtcatc
aacaccaccaacatgaccagcgccgtggtggagttctgggagcgcaacatgcaccagatg
acagacgggctggataagccaggtcagatccgctggcccctggccatcaccctggccatc
gcctggatcctggtgtatttctgtatctggaagggtgttggctggacgggaaaggtggtc
tacttctccgccacctatccctacatcatgctgatcatcctgttcttccgtggagtgacg
ctgcccggggccaaggagggcatcctcttttacatcacgcccaacttccgcaagctgtcc
gactccgaggtgtggctggatgccgccactcagatcttcttctcctacgggctgggcctg
ggatccctgatcgctctcgggagctacaactctttccacaacaacgtctacagggactcc
atcatcgtttgctgcatcaactcctgcaccagcatgttcgccggattcgtgatcttctcc
atcgtgggcttcatggcgcacgtcaccaagaggtccattgctgacgtggcggcctcaggc
cccggcctggcgttcctggcgtacccggaggcagtcacccagctgcccatctctcccctc
tgggccatcctcttcttctccatgctgctcatgctgggcattgacagccagttctgcacg
gtggagggcttcatcaccgcactggtggacgagtacccccggctgctccgcaaccgcagg
gagctgttcatcgctgccgtctgcctcgtctcctacctgatcggcctgtccaacatcact
caggggggcatttatgtcttcaaactcttcgattactactccgccagcggcatgagcctg
ctgttcctcgtgttctttgaatgtgtctccatttcctggttttatggcgtcaaccggttc
tacgacaacatccaggagatggtcggctccaggccctgcatctggtggaagctctgctgg
tccttcttcacccccatcattgtggcgggtgtgttcatcttcagtgctgtgcagatgacc
cctctcaccatggggagctacgtcttccccaagtggggccagggcgtgggctggctcatg
gccctgtcttccatggtcctcatccccggatacatggcctacatgttcctcaccctgaag
ggctccctgaagcagcggatccaggtcatgatccagccgagtgaagacatcgtgcgcccg
gagaacggtccggagcagtcccaggccagcggctcagccagcaaagaggcctacatctag
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