Cervus canadensis (wapiti): 122424922
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Entry
122424922 CDS
T07554
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccad03009
]
122424922 (RRP9)
Ribosome biogenesis [BR:
ccad03009
]
Eukaryotic type
90S particles
Other 90S particles
122424922 (RRP9)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
WDR54
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
122424922
NCBI-ProteinID:
XP_043299115
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All DBs
Position
22:complement(11555979..11564252)
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AA seq
475 aa
AA seq
DB search
MSATGAARKRGKPASGAGAGAGAGKRRRKGDSFGDKGKSKGGGKMNEEISSDSESESLAP
RRTEEEEEEELEETAQEKKLRLAKVYLEQLRQQEEEKAEAREFEEDQVAGRLKEDVLEQR
GRLQKSVAKEIQAPDPADIRILRGHQLSITCLVVTPDDLAIFSAAKDCTIIKWSVESGRK
LHVIPRAKKGAEGQPPGHSTHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGH
RDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTA
GGRDGTVRVWKIPEESQLVFYGHQGSIDSIQLINEEHMVSGADDGSVALWGLSKKRPLAL
QREAHGLRGEPGLEQPFWVSAVAALLNTDLVATGSHNNSVRLWQCGEGFRQLDLLYDIPL
VGFINSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLRRAPRPPAAGS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgacaggggcggctcgtaagaggggaaagccggcctcaggggctggggctggt
gcgggggccggcaagcggcggcgaaagggcgactcctttggggacaagggcaagtccaag
ggtggcggcaagatgaatgaggagatctcgagcgactcggagagtgagagtctagctccc
aggaggactgaggaggaggaggaagaggagctggaggagaccgcacaggagaagaagctg
cgcttggccaaggtctaccttgagcagctcaggcagcaagaggaggagaaggccgaggcc
cgtgaatttgaggaggaccaggtggcagggaggctgaaggaggatgtgctcgagcagagg
ggcaggctgcagaagtcagtggcaaaggagatccaggccccagacccggctgacattcga
attttacggggccaccagctgtctatcacgtgtttggttgtcacccctgacgacctggcc
atcttttctgctgccaaagactgcaccattattaagtggagcgtggagagtggacggaaa
cttcatgtgatccctcgagccaagaagggtgccgaggggcagccccccggccacagcacc
catgtcctctgcatggccatctcttctgatggcaagtacttggcttcaggcgaccgcagc
aaactcattctcatttgggaggcccagagctgccagcacctgtacaccttcacaggacac
cgggacgctgtgtcggggctggcgttccgcagaggcacccaccagctctacagcacgtcc
catgaccgctctgtgaaggtgtggaatgtggcggagaactcctacgtggagacgctcttc
gggcaccaggacgctgtggctgcactagatgctctgagcagggagtgctgtgtgaccgcc
gggggccgggacgggaccgtgcgtgtgtggaagatcccagaggagtcccagcttgtcttc
tatggccaccagggctccatcgacagcatccagctcatcaacgaggagcatatggtgtcg
ggcgcagacgacggttccgtggccctgtggggcctctccaagaagcggccacttgccctg
cagcgtgaggcccatgggctgcggggggagccgggcttggagcagcccttctgggtgtcg
gcagtggcagccctgctcaacacagaccttgtggccacaggctcccacaataattctgtg
cggctctggcaatgtggagagggcttccggcagcttgaccttctctatgacatccccctg
gtgggctttatcaacagcctcaagttctccagtgctggggacttcctggtggctggggtg
gggcaggagcacaggcttggccggtggtggcggatcaaagaggcccggaattctgtctgc
atcatccctctccgcagggcccccaggcccccggctgctggctcctga
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