KEGG   Cervus canadensis (wapiti): 122426108
Entry
122426108         CDS       T07554                                 
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03082  ATP-dependent chromatin remodeling
ccad03083  Polycomb repressive complex
ccad04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122426108 (RBBP4)
   03083 Polycomb repressive complex
    122426108 (RBBP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    122426108 (RBBP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccad03036]
    122426108 (RBBP4)
Chromosome and associated proteins [BR:ccad03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     122426108 (RBBP4)
  Histone modification proteins
   HAT complexes
    HATB complex
     122426108 (RBBP4)
   HDAC complexes
    Sin3A-HDAC complex
     122426108 (RBBP4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     122426108 (RBBP4)
    PRC2.2
     122426108 (RBBP4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     122426108 (RBBP4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122426108 (RBBP4)
  Chromatin remodeling factors
   NuRD complex
    122426108 (RBBP4)
   NuRF complex
    122426108 (RBBP4)
   NuRF complex (fruit fly)
    122426108 (RBBP4)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 CAF1C_H4-bd WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st DSE1_N Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR3_2nd Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_RIG_1st eIF2A ASA1 MIOS_WD40 PAC11 CFAP251_N Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 122426108
NCBI-ProteinID: XP_043300689
LinkDB
Position
24:14452477..14468409
AA seq 425 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggccgacaaggaagcagcctttgatgacgcagtagaagaacgtgtgatcaacgaagaa
tacaaaatatggaaaaagaacaccccttttctttacgatttggtgatgacccatgctctg
gagtggcctagcctaactgcacagtggcttccagatgtaaccagaccagaagggaaagat
ttcagtattcatcgacttgtcctgggaacacacacgtcagatgaacaaaaccatcttgtg
atagccagcgtgcagctccctaacgatgatgctcagtttgatgcctcacactacgacagt
gaaaaaggagaatttggaggttttggctcggttagtggaaaaattgaaatagaaatcaag
atcaaccatgaaggagaggtaaacagggcacgctatatgccccagaatccttgcatcatt
gcaacaaagactccatccagtgatgttcttgtttttgactatacaaaacatccttctaaa
ccagacccttctggagagtgcaacccagacttgcgtctccgtggacatcagaaggaaggc
tacgggctttcttggaacccaaatctcagtgggcacttactgagtgcttcagatgaccac
accatctgcctgtgggacataagtgctgttccaaaggaagggaaagttgtggatgcgaag
accatcttcacagggcacacggcagtagtagaggatgtctcctggcatctgctccatgag
tccctctttgggtcggttgctgatgatcagaaactcatgatctgggatactcgttcaaac
aatacttccaaaccaagccactcagttgatgctcacactgctgaagtgaactgcctttct
ttcaatccttatagtgagttcattcttgccacaggatcagctgacaagactgttgctctg
tgggatctgagaaatctgaaacttaagttgcattcctttgaatcacataaggatgaaata
ttccaggttcagtggtcacctcacaatgagactattttggcttccagtggtactgatcgt
agactgaatgtctgggatttaagtaaaattggagaggaacaatccccagaagatgcagaa
gatgggccaccagagttgttgtttattcatggtggtcacactgccaagatatctgatttc
tcctggaatcccaatgaaccttgggtgatttgttctgtatcagaagacaatatcatgcaa
gtgtggcaaatggcagagaacatttataatgatgaagaccctgaaggaagtgtggatcca
gaaggacaaggatcttag

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