Cervus canadensis (wapiti): 122426117
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Entry
122426117 CDS
T07554
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122426117 (SMARCAL1)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122426117 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
DUF6615
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122426117
NCBI-ProteinID:
XP_043300708
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All DBs
Position
24:30055533..30106762
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AA seq
937 aa
AA seq
DB search
MSLPLTEEQRKKIEANRQKALARRAEKLLAEQHQKPAQSKQGPSQNLPRDPSKSGSHGIF
FKQQNPSSSFHGDQRPQNPHSFPPNTSEQAKGMWQRPEEMPTACPSHHPPNQVTVAGISP
PLANSPPGVPSQQLWGCELGQGHPQASHETQSTPFANTTHKPLAKAKNFQETAASSSGQP
PRDPELETRMARPSTSGQNISGSATPRSEGRLQQKAGTPPHRVAGSQQGRCIRNGERFQV
KIGYNEALIAVFKSLPSRSYDPATKTWNFSMTDYGPLMKAAQRLPGITLQPLEGAEGHVE
SASTSSGIIAKTGLPAAPSLAFVKGQCVLISRARFEADIGYSEDLIALFKQMDSRKYDVK
TRKWSFLLEEYNKLMERVRCLPQVQLDPLPKTLTLAFAAQLQKTSLSPVADVPEADLSRV
DSKLVSSLLPFQRAGVNFAIAQRGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVVVPSS
VRFTWEQAFRRWLPSLNPVDINVVVTGKDRLTDGLVNIVSFDLLSKLEKQLKPPFKVVII
DESHFLKNIKTARCRAAVPLLKVAKRVILLSGTPAMSRPAELYTQILAVKPTFFPQFHAF
GLRYCGAKRQPWGWDYSGSSNLGELKLLLEEAVMLRRLKGDVLSQLPAKQRKMVVVAPGQ
ISARTRAALDAAAKEMTTKDKTKQQQKEALILFFNRTAEAKIPSVIEYILDLLESGREKF
LVFAHHKVVLDAITKELERKRVQHIRIDGSTSSADREDLCQQFQLSPGPAVAVLSITAAN
MGLTFSSADLVVFGELFWNPGVLMQAEDRVHRIGQLSSVSIHYLVARGTADDYLWPLIQE
KIKVLGEAGLSETNFSEMTEATDYFYKDSKQQKIYDLFQKSFEEDGSDMELLEAAESFDP
GSQDTGDTLDESTLTGSPVKKKRFEFFDNWDSFTSPL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcctcttacagaggagcagaggaaaaaaattgaagcaaatcggcagaaggct
ctggcccgaagagctgagaaactgttagcagaacagcatcagaaacctgcccagtccaag
cagggcccatcccaaaacctcccccgagatccttctaagtcagggagccatggcatcttt
ttcaaacaacaaaatcccagcagttcatttcatggtgaccagagacctcaaaatccccac
agttttccaccgaacacctctgagcaggcgaaggggatgtggcagaggccagaagagatg
cccacagcctgcccaagccaccacccaccaaatcaagtgactgtcgctgggatctccccg
cccctggcaaacagtcctccaggggtccccagccaacagctctggggttgtgaattaggt
caaggtcatcctcaggcttcacatgagacccagtcaacaccctttgctaacacaactcac
aagcctttggccaaagcaaagaatttccaggagacagcagcctcttcctctggacagccc
cctagggatcctgaattagagaccagaatggcgagaccctccacctctgggcagaacatt
tcggggagcgcgacgcccaggtcagaaggaagactgcaacagaaagcagggaccccgccg
cacagagtggcaggctcccagcagggaaggtgtatccggaacggagagcgattccaggtg
aagattgggtacaacgaggcgctcattgccgtgtttaagagtctgcccagcagaagttac
gatcctgccaccaagacttggaacttcagcatgaccgactatggtcccctaatgaaagca
gcccagcgcctcccggggatcaccctgcagcctttggaaggggctgagggccacgtggag
tcagcctccaccagcagtggcattatagccaagaccggccttcctgcagctccctccctg
gcctttgtcaaagggcagtgcgtgctcatctcccgggcccgcttcgaggcagacatcggc
tattccgaagacctgattgcactgtttaaacagatggattccagaaaatacgatgtcaag
acccggaagtggagctttctcctggaggaatacaataaactcatggaaagagtgcgctgc
cttccacaagttcagctggatcctctgcccaagaccctcaccctggctttcgccgctcag
ctccagaagacgtctctctctcccgtggcagatgtccccgaggcagacctgtccagggtg
gattccaagctcgtgtctagcctgctgccctttcagagagctggagtcaatttcgctata
gcacaaagaggccgcctgctgcttgccgacgacatgggcctggggaagaccatccaagcc
atctgcatagcggcctattaccggaaggagtggccgctgctcgtggtggtaccgtcatcc
gtgcgcttcacctgggagcaggccttccgtcggtggctgccatctctgaacccagtcgac
atcaatgtcgtggtgaccgggaaggaccgcctgacagacggcttggtcaacattgtcagt
tttgatcttctgagcaagttagaaaagcagctaaaacccccttttaaagttgtcatcatt
gatgaatcccacttcctcaaaaacattaagactgcccgctgtcgcgcagctgtgccgctc
ctcaaggttgccaagagggtgatcttactgtcgggcacgccagccatgtcccggccagca
gagctgtacacacagatcctcgccgtcaagccgacattcttccctcagttccatgccttt
ggacttcgctactgtggggccaagcggcagccctggggatgggactactccggctcctcc
aacctgggggagctgaagctcctgctggaggaggcggtcatgctgcgacgcctcaagggc
gacgtcctctcccagctcccagccaagcagcgcaagatggtggtggtcgccccaggccag
atcagcgccaggaccagagccgccctggacgccgccgccaaggagatgaccaccaaggac
aaaactaagcagcagcaaaaagaagccctcattctcttcttcaacagaactgctgaagct
aaaatcccatctgtcatcgaatatatcctggacctgctggaaagtggacgagagaagttt
cttgtatttgcacaccataaggtggttctggatgcaattactaaggagcttgagaggaag
cgcgtgcagcacatccgtatcgacggctccacctcctcggccgaccgcgaggacctctgc
cagcagttccagttgtccccgggccccgccgtggccgtgctgtccatcaccgccgccaac
atgggcctcaccttctcctcggctgacctggtggtgttcggggagctgttttggaaccca
ggggtgctgatgcaggctgaggaccgggtgcaccgcatcggacagttgagctccgtgagc
atccactacctggtggcaagaggcacggccgatgactacctctggcccctgattcaagag
aagattaaagttctgggtgaagccgggctctctgagaccaatttttcagaaatgacagaa
gccacagattacttctacaaggactcaaagcagcagaagatctacgacctattccagaag
tccttcgaggaagacggaagcgatatggagctcctggaggcagcagagtcctttgatcca
ggttcccaggacacgggagacacgctggatgaaagcacattgacgggcagcccagtgaag
aagaagagatttgaattttttgataactgggacagctttacctctcctctataa
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