KEGG   Cervus canadensis (wapiti): 122426238
Entry
122426238         CDS       T07554                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03082  ATP-dependent chromatin remodeling
ccad03083  Polycomb repressive complex
ccad04110  Cell cycle
ccad04213  Longevity regulating pathway - multiple species
ccad04330  Notch signaling pathway
ccad04350  TGF-beta signaling pathway
ccad04613  Neutrophil extracellular trap formation
ccad04919  Thyroid hormone signaling pathway
ccad05016  Huntington disease
ccad05031  Amphetamine addiction
ccad05034  Alcoholism
ccad05165  Human papillomavirus infection
ccad05169  Epstein-Barr virus infection
ccad05200  Pathways in cancer
ccad05202  Transcriptional misregulation in cancer
ccad05203  Viral carcinogenesis
ccad05206  MicroRNAs in cancer
ccad05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122426238 (HDAC1)
   03083 Polycomb repressive complex
    122426238 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    122426238 (HDAC1)
   04350 TGF-beta signaling pathway
    122426238 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    122426238 (HDAC1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    122426238 (HDAC1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    122426238 (HDAC1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    122426238 (HDAC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    122426238 (HDAC1)
   05202 Transcriptional misregulation in cancer
    122426238 (HDAC1)
   05206 MicroRNAs in cancer
    122426238 (HDAC1)
   05203 Viral carcinogenesis
    122426238 (HDAC1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    122426238 (HDAC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    122426238 (HDAC1)
   05165 Human papillomavirus infection
    122426238 (HDAC1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    122426238 (HDAC1)
  09165 Substance dependence
   05031 Amphetamine addiction
    122426238 (HDAC1)
   05034 Alcoholism
    122426238 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccad03036]
    122426238 (HDAC1)
Enzymes [BR:ccad01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     122426238 (HDAC1)
Chromosome and associated proteins [BR:ccad03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     122426238 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     122426238 (HDAC1)
    BRAF-HDAC complex
     122426238 (HDAC1)
    REST complex
     122426238 (HDAC1)
    SHIP complex
     122426238 (HDAC1)
    MiDAC complex
     122426238 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     122426238 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122426238 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    122426238 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 122426238
NCBI-ProteinID: XP_043300932
LinkDB
Position
24:14172765..14205283
AA seq 482 aa
MAQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKQEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaagaggaaagtctgttactattacgacggggatgttgga
aattactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcacaat
ttactccttaactatggtctctaccggaagatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagtgatgactacattaaattcttacgctccattcgc
ccagataacatgtctgagtacagcaagcagatgcagagattcaacgttggtgaggactgt
ccagtatttgatggcctgtttgagttctgtcagctgtctactggtggctctgtggcaagt
gctgtgaaacttaataagcagcagacggacatcgctgtgaattgggctgggggcctacac
catgcaaagaagtccgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccacggc
gatggcgtggaagaggccttctataccacagaccgagtcatgactgtgtcctttcataaa
tatggagagtacttcccaggaactggggacctacgggatattggagctggcaaaggcaag
tattatgctgttaactaccctctccgagatgggattgacgacgagtcctatgaggccatt
ttcaagccggtcatgtccaaagtaatggagatgttccagcccagtgcagttgtcttgcag
tgtggatctgactccctgtctggggatcggttaggctgcttcaatttgaccatcaaaggg
catgccaagtgtgtggaatttgtgaagagcttcaacctgcctatgctgatgttgggagga
ggtggctataccatccgtaatgtcgcccgatgctggacatatgaaacagctgtggccctg
gacacggagatccctaatgagcttccatacaacgactacttcgaatactttggaccagat
ttcaaacttcatatcagtccttccaatatgactaaccagaacactaatgagtacctggaa
aagatcaaacagcgactgtttgagaacctgagaatgctgccccacgcacctggggtccaa
atgcaggccatccccgaggacgccattccagaggagagtggtgatgaggatgaagaagac
cctgacaagcgcatctcaatctgttcctcggacaaacgaattgcctgtgaggaagagttc
tccgactctgatgaggagggagaaggcgggcgcaagaactcttccaacttcaagaaagcc
aagagagtcaaaacagaagatgaaaaggagaaagatccagaagagaagaaagaagtcaca
gaagaggagaaaaccaaggaagagaagcaagaagccaaaggggtcaaggaagaggtcaag
ttggcctga

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