Cervus canadensis (wapiti): 122426292
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Entry
122426292 CDS
T07554
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122426292 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122426292 (TRIP12)
Enzymes [BR:
ccad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122426292 (TRIP12)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
HECT type E3
122426292 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
122426292
NCBI-ProteinID:
XP_043301027
LinkDB
All DBs
Position
24:17354552..17504074
Genome browser
AA seq
2071 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSEKQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPKALQHTESPSETSKPHSKSKKRHLDQEPQLKSAPSPSTSKAHTRKS
GAAAGSRSQKRKRTESSCIKSASVSEATGAEERSAKPTKLASKSAASAKAGCSTITDSSS
AASTSSSSSAVASASSAVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEPSKTAGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASASRRGSGLGKRGAAEARRQEKMADPEGNQETVNSSAARTDETPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQSFTDIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTS
LICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQ
VGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARA
QLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNH
AVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLT
SPPKACANGSGSLGSTPSVNSGTATAATNASADLGSPSLQHSRDDSLDLSPQGRLSDVLK
RKRLPKRGSRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNN
IEPARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQ
RLCAATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVS
REIRLKRFLHVFFSSPLPGEEPIERVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPS
GNGTGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERY
LVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQ
AVRQFSIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESNKDCVGGKRGRAQT
APTKTSPRNAKKHDELWNDGVCPSVSNPLEVYLIPTAPENITFEDPSLDVILLLRVLHAV
SRYWYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFF
FPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQ
AESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPK
GSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLP
FYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLT
MNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSF
RDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFE
ILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVN
YLKLPDYSSLEIMREKLLMAAREGQQSFHLS
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcgataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcgtca
tctgctgtcatagttccacaaccagaggatccagacagagccaatacttcagaaaagcag
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgccaaaaaacccaaagcacttcagcatact
gaatctccctcagaaacgagtaagccacatagtaagtcaaagaagagacacttagaccag
gagccacaactgaaatctgcaccatctccatccacaagcaaggctcataccagaaagagt
ggggccgctgctggttcacggagtcagaaaagaaagaggacagagagttcttgtataaag
agtgcttctgtgtctgaagccactggtgccgaagagagatctgcaaaacctaccaagctg
gcttcaaaatcggcggcctcagccaaagctgggtgtagcaccatcaccgactcgtcgtcc
gctgcctcgacctcctcctcgtcctctgccgtcgcctcggcctcctctgctgttccacca
ggtgccagggtgaaacaaggaaaagaccagaacaaggccaggcgttcccgctcagcatcc
agccccagccccagaagaagcagcagggaaaaggaaccgagtaaaactgctggctcttca
aagttcgattgggctgctcgcttcagccctaaagtcagccttcctaaaacaaagctgtct
cttccagggtcttctaagtcagagacatccaaacctggaccttccggattacaggccaaa
ttagcaagtttaagaaaatctaccaagaagcgcagcgaatccccacctgccgagctcccc
agtttgaggcggagcacacgccaaaagaccacgggctcctgcgctagtgccagtcggcga
ggctctggcctgggcaaaagaggagcagctgaagctcgtcgacaggagaagatggccgac
cctgaaggcaaccaggagacggtgaactcttcagctgcacggacagatgagactccccag
ggagcggcagcctctagttctgttgcaggggctgtgggcatgaccacctctggggagagc
gaatctgatgactccgagatgggacggttacaagctctgttagaggccaggggtcttccc
cctcacctgtttggtcctcttggtcctcggatgtcacagcttttccataggacaattgga
agcggagctagttctaaggcccagcagcttctgcaaggactacaagcaagcgacgaaagc
cagcagctccaggccgttattgagatgtgtcagttactggtcatggggaatgaggagacg
ctgggagggtttcctgtcaagagtgtggttccagctttgataacattgctgcagatggag
cataattttgatattatgaaccatgcctgtcgagccttaacgtacatgatggaagcactt
cctcgatcatcggctgtggtagtagatgcaattcctgtctttttagaaaagctgcaagtt
attcagtgtattgatgtggccgagcaggccttgacggccttggagatgttatcacgtaga
cacagtaaagccattctccaggcgggtggtttggcagactgcttgctgtatctagaattc
ttcagcataaatgcccaaagaaatgcactagcaattgcagccaattgctgccagagtatc
acgccggatgaatttcattttgtggcggattccctcccattgcttacccaaaggctaacc
caccaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgcctagtggacaac
tttcaacatgaagagaatttactccagcaggttgcttccaaagatctgctaacaaatgtt
caacaactattggtagtaactccaccaattttaagttctgggatgtttataatggtggtt
cgcatgttttctctgatgtgttccaattgtccaactttagcagttcaacttatgaagcaa
agctttacagacattgcagaaacgcttcactttctcctgtgtggtgcctccaatggaagt
tgtcaggagcagattgatcttgttccacgaagtcctcaagaactgtatgagctgacgtct
ctgatttgtgaacttatgccatgtttaccaaaggaaggcatttttgcagttgataccatg
ctgaagaagggcaatgcacagaacacggatggggccatatggcagtggcgggacgaccgg
ggcctctggcacccctataacaggatagacagccggatcattgaggtagcagcccatcag
gtcggtgaggatgagataagcttgtccactctgggacgagtttatactattgattttaat
tctatgcagcaaatcaatgaggacacgggaacagcacgtgccattcagagaaaacctaac
cccttagccaatactaacactagtggatattcagagttaaagaaggatgatgctcgagca
cagcttatgaaagaggatccggaactggctaagtcttttattaagacgttatttggtgtt
ctttatgaagtgtatagttcctcagcaggacctgcggtcagacataagtgccttagagca
attcttaggataatttattttgcggatgccgaacttctaaaggatgtcctgaaaaaccat
gctgtttcaagtcatattgcttccatgctatcaagccaagacctgaagatagtagttgga
gcccttcaaatggcggagatcttaatgcagaagttacctgatatttttagtgtttacttc
agaagagaaggggtgatgcatcaggtcaagcacctagcggagtccgagtcgttgttgacg
agcccaccaaaggcctgtgcaaatgggtccgggtccttggggtccacgccgtcggtcaac
agtgggacagccacggccgccaccaacgcctcggctgacctggggtcccccagcttgcag
cacagcagagacgattctctagacctgagccctcaaggtcgattaagtgatgttctaaag
agaaaacgactgccaaaacgaggatcaagaaggccaaagtattcacctccaagagatgat
gacaaagtagacaatcaagctaaaagccccaccactactcagtcacctaagtcttctttc
ctggcaagcttgaatccaaaaacgtggggaaggttaagcgcacagtctaatagcaacaac
attgagccagcacgaaccgcaggagttagtggtcttgccagggccgcctcaaaggacacc
atctccaataatagagaaaaaattaaaggttggattaaagagcaggcacataaatttgta
gagcgttacttcagttctgagaacatggatggaagcaaccccgcactgaatgtccttcag
agactttgtgctgcaaccgaacaactcaacctccaggtggatggtggagctgagtgcctt
gtagaaatccgtagcatagtctcagagtctgatgtttcatcgtttgaaatccaacacagt
ggatttgtgaagcagctgttgctttatttgacatctaaaagtgaaaaggacgctgtgagc
agagagatcagattaaagagattccttcatgtatttttttcttctccacttcctggagaa
gagcccattgaacgagtagaaccagtgggtaatgcacctttgttggcattagttcacaaa
atgaacaactgcctcagccagatggaacaatttccagtcaaagtgcatgactttcccagt
ggaaatgggacaggaggcagcttctctctcaacagaggatcacaggctttaaaatttttc
aacacacatcagttaaaatgccagttacaaaggcatccagactgtgcaaatgtgaagcag
tggaagggtggacctgtcaagattgaccccctggctttggtgcaggctattgagagatac
cttgtagttagagggtatggaagagtaagagaagacgatgaagacagtgatgacgatggc
tctgatgaggaaatagacgaatctctggctgctcagttcttaaattccggaaatgtgaga
cacaggctgcagttttacatcggagagcatttgctaccgtataacatgactgtgtatcag
gccgtacggcagttcagtatacaggctgaagatgaacgggagtccaccgatgacgagagc
aatcctctaggaagagctggtatttggacgaaaactcatacgatatggtacaaacctgtg
cgagaggacgaagaaagtaataaagattgtgttggtggtaaaagaggaagagcccagaca
gctccaacaaaaacttctcctagaaatgcaaaaaagcatgatgagctgtggaatgatgga
gtgtgcccgtcggtatcaaatcctttagaagtttacctcatacccacagcacccgaaaat
ataacttttgaagacccgtcattagatgtgattcttcttttaagagttttacacgccgtc
agtagatactggtattacttgtatgataatgcaatgtgcaaggagattatcccaactagt
gaatttattaacagtaagttgacagcaaaagcaaataggcagcttcaagatcctttagta
atcatgacaggaaacatcccaacatggctcactgaactaggaaaaacctgcccatttttc
ttcccttttgatacccggcaaatgcttttctatgtaactgcgtttgatcgggaccgagca
atgcagagattacttgataccaacccagagatcaaccagtctgattctcaagatagcaga
gttgcacctagattggatagaaaaaaacgtactgtgaacagagaggagctgctgaaacaa
gcggagtctgtaatgcaggatcttggcagctcacgggccatgttagaaatccagtatgaa
aatgaggttggcacaggtcttgggcctacactggagttttatgcacttgtatctcaggaa
ctgcagagagctgacttgggtctctggagaggggaggaagtaactcttagcaatccaaaa
ggaagccaagaagggaccaagtatattcaaaacctccaaggcctgtttgcgcttcccttt
ggtaggacagctaagccagctcatatcgcaaaggttaagatgaagtttcgcttcttagga
aaactaatggccaaggctatcatggatttcagattggtggaccttcccctgggcttacct
ttttataaatggatgctccggcaagaaacttcgctgacatcacacgatttgtttgacatt
gacccagttgtagccaggtcagtgtatcaccttgaagacatcgtccgacagaagaaaaga
cttgaacaagataaatcccagaccaaagagagtctccagtatgcattagaaaccctgact
atgaatggctgctccgtggaggatctgggattggatttcactctgccagggtttcctaac
attgaactaaagaaaggaggaaaggatataccggtcaccatccacaatttggaggagtat
ttaagactggttatattttgggcactaaacgaaggtgtttccaggcaatttgattcattt
agagatggatttgaatcggtcttcccactcagtcatctccagtacttctacccagaagaa
ctggatcagcttctgtgtggtagtaaagcagacacttgggatgcaaagacactgatggaa
tgctgcaggccagatcacggttacactcatgacagtcgggctgtgaagttcttgtttgag
attctcagtagttttgataatgaacagcagaggttatttctccagtttgtgacaggtagc
ccacgattgcctgttggaggcttccggagcttgaatccacctttgaccattgtccggaag
accttcgaatcaacagagaacccagatgacttcctaccctctgtcatgacctgtgtgaac
tatcttaagttgccggactattcaagcctcgagataatgcgggaaaagctgttgatggcc
gcgagagaagggcagcagtcgttccatctttcctga
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