Cervus canadensis (wapiti): 122426625
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Entry
122426625 CDS
T07554
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04020
Calcium signaling pathway
ccad04080
Neuroactive ligand-receptor interaction
ccad05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122426625 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122426625 (PTAFR)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
122426625 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ccad04030
]
122426625 (PTAFR)
G protein-coupled receptors [BR:
ccad04030
]
Rhodopsin family
Others
Platelet activating factor
122426625 (PTAFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
Motif
Other DBs
NCBI-GeneID:
122426625
NCBI-ProteinID:
XP_043301625
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Position
24:complement(10578694..10622507)
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AA seq
382 aa
AA seq
DB search
MLSAAPISSSASLSPPGPLSLQFLRNRQDPMTSSHFQPIAMEPNNSFRVDSEFRYTLFPI
FYSIVFVLGVIANSYVLWVFANLYPSKKFNEIKIFMVNLTMADLLFLVTLPLWIVYYYNE
GDWILPKFLCNLAGCFFFINTYCSVAFLAVITYNRFQAVTRPIKTAQATTRKRGILLSLT
IWVSIVGAASYFFVLDSTNKERSKSGSGNITRCFEHYEKGSIPVLIIHIFLVFSFFLVFL
VILFCNLVIIRTLLTQQVQMQRNAEVKRRALWMVCTVLAVFIICFVPHHLVQLPWTLAEL
GFQDTDFHQAINDAHQVTLCLLSTNCVLDPIIYCFLTKKFRKHLTEKFYSMRESRKCSRA
TSETGTEVVLQLKDGPVKSLRN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctctcggcggcccccatctcctcctcagcctctttgtcacctcctggaccgctgtcc
ctacagtttctcaggaacaggcaggatcctatgaccagcagccacttccagcccatagcg
atggagccaaacaattcctttcgtgtggactccgagttccgatacaccctcttcccaatt
ttttacagcatcgtctttgtgctgggggtcattgctaacagctatgtgctgtgggtcttt
gccaacttgtacccttccaagaaattcaacgagataaagatcttcatggtgaacctcacc
atggctgacctgctcttcctggtcaccctgcccctgtggatcgtctactactacaacgag
ggcgactggattctccccaaattcctgtgcaacctggctggctgcttcttcttcattaac
acctactgctcagtggccttcctggctgtcatcacttacaaccgcttccaggcagtgaca
aggcccatcaagactgctcaggctaccacccgcaagcgtggcatccttctgtccctgact
atctgggtgtccattgtgggcgcagcatcctacttcttcgtcctggactcgaccaacaag
gagcgcagcaagagcggctcgggcaacatcacacgctgctttgagcattacgagaagggc
agcatcccagtcctcatcatccacatcttcctcgtgttcagcttcttcctcgtcttcctc
gtcatcctcttttgcaacctggtcatcatccgcacgctgctcacgcagcaggtgcagatg
cagcggaatgccgaggtcaagcgccgggcgctctggatggtctgcacggtcctggctgtg
ttcatcatctgcttcgtgccccaccacctcgtgcagctgccctggaccctggccgagctg
ggcttccaggacaccgacttccaccaggcgattaacgatgcgcatcaggtcactctctgc
ctccttagtaccaactgcgtcttagaccccattatctactgtttcctcaccaagaagttc
cgcaagcacctcacggagaagttctacagtatgcgcgagagccggaagtgctcccgggcc
acctcggagacgggcacggaagtggtcctgcagctcaaagatggccctgtcaaatccctc
agaaattag
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