Cervus canadensis (wapiti): 122427342
Help
Entry
122427342 CDS
T07554
Symbol
NUP107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03013
Nucleocytoplasmic transport
ccad05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122427342 (NUP107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122427342 (NUP107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122427342 (NUP107)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122427342 (NUP107)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122427342 (NUP107)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122427342 (NUP107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF2310
HisK_sensor
Motif
Other DBs
NCBI-GeneID:
122427342
NCBI-ProteinID:
XP_043302690
LinkDB
All DBs
Position
25:12164591..12214405
Genome browser
AA seq
925 aa
AA seq
DB search
MDRSGFGEMSSPVIREAEVTRTARKQSAQKRALIRASQDEVFSNTTPRNQVMPRTPSSFR
QPFTPPSRSLLRQPDVSCILGTGGRSPRLTQSSGFLGNLSMVTNLDDSNWATAFSSQRAG
LFTNAEPHSVTEDVTLSAVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYENI
CSSQVNMLNKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSALEDESMF
AITALNASEKAVVEALFQRDSLVRQSQLVVDWLESIAKDEIGDFSDNIEFYAKSVYWENT
LHTLKQRQLSSYIGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTE
EAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGNPYRCIWKISCWRMAEDELF
NRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVMTLDETEELPR
EYLEANWTLEKVFEELQATDKKRVLEENQEHYHVVQKFLILGDIDGLMDEFSKWLSKSRN
SLPGHLLRFMTHLILFFRTLGLQTKEEISIDVLKTYIQLLINEKHTNLIAFYTCHLPQDL
AVAQYALFLEGVTEFEQRHHCLELAKEADLDIAAITKTVVENIRKKDDGEFSHHDLSPAL
DTGTTEEDRLKIDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDSI
AEIYNQWEEQGMDSPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLTTQA
TFTEKVAHEHKEKKYEMDYGIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEEDH
ERTHQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKL
LQKLRESSLMLLDQGLDPLGYEIQS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagtggctttggagagatgtcctctcctgtgatccgggaggcagaggtgact
cggactgctcgcaagcagagtgcccagaaaagagccctgattcgggcatcccaggatgaa
gttttttctaataccactccaagaaaccaggttatgccccgaactcccagctcatttcga
caaccttttactccaccaagccggagcctactgaggcagccagatgtatcctgcattctt
ggaactggagggaggtctccccggcttacacagtcttcagggttcttgggaaatctgtct
atggtgactaacctggatgacagtaactgggccactgctttctcatcacagcgtgcaggg
ctcttcacaaacgcagagccccacagtgtgacggaggacgtgaccctcagcgctgttatg
ttacgtgaggatgatcctggagaagctgcatccatgagtatgttttctgatttcctgcag
tcttttttgaagcactcttcaactactgtttttgaccttgtagaagagtatgagaacatt
tgtagtagtcaggtaaatatgctgaataaaatagtgagccgagcaacacctggacttcag
aagttttcaaaaacagccagcatgctctggcttcttcaacaggagatggtcacatggagg
ctgctggcttctttgtatagagaccgaatacagtctgcattagaagatgaaagtatgttt
gcaattactgctcttaatgccagtgaaaaagcagttgtggaagcattgtttcagagagat
tcacttgtccgacaaagtcagctggtggtagattggttagaaagcattgccaaagatgaa
attggagatttttccgataatattgaattttatgcaaaatcagtatattgggaaaatact
ctgcataccttgaaacagcggcaactatcttcttatataggaagtgtccgtcctcttgtc
actgaattggaccctgatgctcctataagacagaagatgccacttgatgatctggataga
gaagatgaagtcagattactcaaatatcttttcactctaattcgtgctggaatgaccgaa
gaggcacagagactctgcaaacgctgtggccaggcgtggagagctgcaacacttgaaggc
tggaaactctatcatgaccccaatgttaatggaggaacagaattagaacctgttgaaggg
aatccatatagatgcatttggaaaataagttgttggagaatggcagaagatgagcttttt
aatagatatgagagagcaatttatgcagctctaagtgggaatctcaagcagctgcttcct
gtctgtgatacttgggaggacacagtgtgggcctactttagggtgatggtggacagtctg
gttgaacaggagatcaggacatcagtaatgactctggatgaaactgaagaactccctaga
gagtatttggaagcaaattggaccttagaaaaggtttttgaagaacttcaagctactgat
aaaaagagagttctagaagagaatcaagaacattatcatgtagttcaaaaattccttatc
ctgggagacattgatggtttgatggatgaatttagcaaatggctttctaaaagcaggaac
agtctacctggacacctcctccgcttcatgactcacctcattttgtttttccgcactctg
ggactacagaccaaagaagaaatttccattgacgttttaaagacatatatacagctttta
ataaatgagaaacatacaaatctcatagcattttatacctgtcatttgcctcaagacctt
gctgttgcccagtatgcattatttttggaaggtgttacagagtttgaacagcgccaccat
tgcctcgagctggccaaagaggcagatttggatattgcagctataacaaaaactgtagtt
gagaatattcgaaagaaagatgatggtgaattcagtcatcatgacctgtccccagcgctg
gatacgggtactactgaggaagaccgattaaaaattgatgtaattgactggttggtgttc
gacccagcacagagagcagaagcactaaagcaaggcaatgcgataatgaggaaattcttg
gcctcaaaaaagcacgaagctgcaaaagaagtatttgtgaaaattcctcaggattcaata
gcagaaatctataaccagtgggaggagcaaggaatggacagcccacttcctgctgaagat
gataatgctatccgagaacatttgtgcatcagagcttacttggaagcccatgaaaccttt
aatgagtggtttaagcatatgaactcagctccacaaaaacctaccttgacaactcaagca
acttttactgagaaagtggcccatgaacacaaagaaaagaaatatgaaatggattatggt
atttggaaagggcatttggatgccctaactgctgatgtgaaggaaaaaatgtacaatgtc
ttgttgtttgttgatggagggtggatggtggatgttagagaggatgctgaggaagaccat
gaaagaacacatcagatggttctactgagaaagctttgtctgccgatgttgtgttttctg
cttcacaccatattgcacagtactggtcagtatcaggaatgcctgcagttagcagatatg
gtgtcctctgagcgccacaaactgtatctggtgttttctaaggaagaattaaggaaattg
ctacagaagttaagggaatcctctctaatgctcctcgaccagggccttgatccattagga
tatgaaattcagtcataa
DBGET
integrated database retrieval system
