Cervus canadensis (wapiti): 122427533
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Entry
122427533 CDS
T07554
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122427533 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122427533 (SCN8A)
Ion channels [BR:
ccad04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122427533 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Lustrin_cystein
HB_ELP1
Mucin_bdg
Motif
Other DBs
NCBI-GeneID:
122427533
NCBI-ProteinID:
XP_043303018
LinkDB
All DBs
Position
25:27600586..27796474
Genome browser
AA seq
1991 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTKGF
DWEEYINNKTNFYIVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEEGAGSPRSSSEI
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKGFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSRSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGYSGYSQGSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGGPGSHIS
GRLLPEVKIDKAATDDSATTEVEIKKKGPGSLLVSMDQLASYGRKDRINSILSVVTNTLV
EELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLF
MAMEHHPMTPQFEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSL
MELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKINQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVA
WIKLKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSG
IGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDT
SSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRK
TCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLL
KWTAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNESSEIRFEIED
VNNKTECEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPD
EQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQ
MENILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFG
MSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCNLDKEHPG
SGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFY
EIWEKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILF
AFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGH
LARRGFICKKTTSNKLENGGTHREKKESTPSTASLPSYDSVTKPEKEKQQRAEEGRRERA
KRQKEVRESKC
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacggctgctcgcaccaccaggccctgacagtttcaagcctttcacccctgag
tcactggcgaacatcgagaggcgcattgccgagagcaagctcaagaaaccacccaaggcc
gatggcagtcatcgggaggacgatgaggacagcaagcccaagccaaacagtgacctggag
gcagggaagagtttgcctttcatctatggggacatcccacaaggcttggtcgcggttccc
ctggaggactttgacccatactatttgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagtgccacgcctgccttgtacattttaagtccttttaacctg
ataagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaaccctcctgactggtcgaagaat
gtggagtacacattcacagggatttatacatttgaatcactagtgaaaatcattgcaaga
ggtttctgcatagatggctttacctttttacgggatccatggaactggttagatttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggcctgaagaccatc
gtgggtgccctgattcagtccgtgaagaagctgtcagacgtgatgatcctgacagtgttc
tgcctgagtgtctttgccttgatcggactgcagctcttcatgggaaacctgcgaaacaag
tgtgtggtgtggcccatcaacttcaacgagagctatcttgaaaacggcaccaagggcttt
gattgggaagagtacatcaacaataaaacaaatttctacatagttcctggtatgctggaa
cctttgctctgtgggaacagttctgatgctgggcaatgtccagagggataccagtgtatg
aaggcaggaaggaatcccaactatggttacacgagctttgacactttcagctgggccttc
ttggcattgtttcgccttatgacccaggactactgggaaaacttgtatcaattaacctta
agagcagctgggaaaacgtacatgatcttcttcgtcttggtcatctttgtgggttctttc
tatctggtgaacttgatcctggctgtggtggccatggcttatgaagagcagaatcaggca
acactggaggaggcagagcagaaagaggctgaattcaaagcaatgttagagcaacttaag
aagcaacaggaagaagcacaggcggcggcgatggccacttcagcaggaactgtctcagaa
gatgccatagaggaagaaggtgaagaaggagcaggctctccccgcagctcatctgaaatc
tctaaactgagttccaagagtgccaaagagagacggaaccggagaaagaagaggaagcaa
aaggagctctctgaaggagaggagaaaggggatcctgagaaggtgttcaagtcagaatca
gaagatggtatgaggaggaagggctttcggctcccagacaacagaatagggaggaagttt
tccatcatgaatcagtcactgctcagcattcccggctccccattcctctcccgccacaac
agcaggagcagcatcttcagcttccggggtcccgggcggttccgggatccgggctcagag
aatgagtttgcggacgacgagcacagcacggtggaggagagcgagggccgccgggactcg
ctcttcatccccatccgggcgcgcgagcgccgcagcagctacagcggctacagcggctac
agccagggcagccgctcgtcgcgcatcttccccagcctgcggcgcagcgtcaagcgcaac
agcacagtggactgcaacggcgtcgtgtccctcatcggcggccccggctcccacatcagc
gggcgtctcctgccagaggtgaaaatagataaggcagctactgatgacagtgctacaact
gaggtggaaattaagaagaaaggtcctggatctctcttagtttctatggaccaactggct
tcctatggacgaaaggacaggatcaacagtatattgagcgttgttacaaatacgctggta
gaagagctggaagagtctcagaggaagtgccccccatgctggtataaatttgccaacact
tttctcatctgggagtgtcacccctactggataaagctgaaggagattgtgaacctgatt
gtcatggacccttttgtggacctggccatcaccatctgcatcgtcctgaacaccctgttt
atggcaatggagcaccaccccatgacaccacagtttgaacacgtcttggctgtgggaaat
ctggttttcactggaattttcacagcggaaatgttcctgaagctcatagccatggatccc
tactattatttccaagaaggttggaacatttttgatggatttattgtctccctcagttta
atggaactgagtctagcagacgtggaggggctttcggtgctgcgatctttccgattgctc
cgagtcttcaaattggccaaatcctggcccaccctgaacatgctgatcaagattattgga
aattcagtgggtgccctgggcaacctgacccttgtgctagccattattgtcttcatcttt
gccgtggtggggatgcagctctttggaaagagctacaaagaatgtgtctgcaagatcaac
caggactgtgaactccctcgctggcacatgcatgactttttccattctttcctcattgtc
tttcgagtgttgtgcggggaatggatcgagaccatgtgggactgcatggaggtggctggc
caggccatgtgcctcattgtcttcatgatggtcatggttattggcaacttggtggtgctg
aacctgtttctggccttgcttctgagctccttcagtgctgacaacctggccgccacggac
gatgatggagaaatgaacaacctgcaaatctccgtgatccggatcaagaagggcgtagcg
tggatcaagctgaaagtgcatgccttcatgcaggcccatttcaagcagcgcgaggccgac
gaagtgaaacctctggacgagctgtacgagaagaaagccaactgcatcgccaaccacacc
ggcgccgacatccaccggaacggtgacttccagaagaatggcaatggcaccaccagcggc
ataggcagcagcgtggagaagtacatcatcgacgaggaccacatgtccttcatcaacaat
cccaacctgaccgtgcgagtgcccatcgctgtcggcgagtccgattttgagaacctaaac
accgaggacgtcagcagcgagtcggatcctgaaggcagcaaagataaactggacgacacc
agctcctctgaaggaagcaccattgacatcaaaccagaagttgaagaagtccctgtggag
cagcctgaggagtacttggatccagatgcctgcttcacggaaggttgtgtccagagattt
aagtgctgccaggtcaacattgaggaaggactgggcaagtcttggtggatcctgcggaaa
acctgcttcctcatcgtggagcacaactggttcgagaccttcatcatcttcatgattcta
ctcagcagtggtgccctggcctttgaggacatctacatcgagcagaggaagaccatccgt
accatcctggagtacgctgataaagtcttcacctacatcttcatcctggagatgttgctc
aagtggacagcctatggcttcgtcaagttcttcaccaatgcctggtgctggctggacttc
ctcatcgtggctgtctctttagtcagccttatagctaatgccctgggctactcggaacta
ggtgccataaagtcccttaggaccctaagagctttgagacccttaagagccttatcacga
tttgaagggatgagggtggtggtgaatgccttggtgggcgccatcccctccatcatgaat
gtgctgctggtctgtctcatcttctggctgattttcagcatcatgggagttaacctgttt
gcgggaaagtaccactattgctttaatgagtcttctgagatccgatttgaaattgaagat
gtcaacaataaaacagagtgtgaaaagctcatggaggggaacaacacagaaatcagatgg
aagaacgtgaagatcaactttgacaacgttggggcaggatatctggcgcttcttcaagtg
gcaaccttcaaaggctggatggacatcatgtatgcagctgtagattcccgaaagcctgat
gagcagcctaagtatgaggacaacatctacatgtacatctactttgtcatcttcatcatc
ttcggctccttcttcaccctgaacctgttcattggtgtcatcattgataacttcaatcaa
caaaagaaaaagtttggaggtcaggacatcttcatgaccgaagaacagaagaagtactac
aatgccatgaaaaagctgggctcaaagaaaccacagaaacccatcccccgccctctgaac
aaaatccaagggatcgtctttgattttgtcactcaacaagccttcgacattgttatcatg
atgctcatttgccttaacatggtgacgatgatggtggagacagatactcagagcaagcag
atggagaacattctctactggatcaacctggtcttcgtcatcttcttcacctgtgagtgt
gtgctcaaaatgtttgccttgcggcactactacttcaccattggctggaacatcttcgac
ttcgtggtggtcatcctctccattgtgggaatgttcctggctgatatcattgagaaatac
tttgtctccccaaccctgttccgagtcatccgattggcccgtattgggcgtatcctgcgt
ctgatcaaaggcgccaagggaattcgtaccctgctctttgccttaatgatgtccttgcct
gctctgttcaacatcggccttctgctcttcctggtcatgttcatcttctccatctttggg
atgtctaattttgcatacgtgaagcacgaggctggcattgatgacatgttcaactttgag
accttcggcaacagcatgatctgcctctttcagatcaccacgtcggctggttgggacggc
ctcctgctgcccatcctaaaccggccccctgactgcaatttggataaggaacacccaggg
agcggctttaaaggagactgcgggaacccttcggtgggcatcttcttctttgtgagctac
atcatcatctccttcctgattgtggtgaacatgtacattgccatcatcttggaaaacttc
agcgtagccacagaggaaagtgcagaccctctgagcgaggacgactttgagaccttctat
gagatctgggagaagttcgaccccgatgccacccagttcattgagtactgtaagctggca
gactttgcagatgccctggagcatcctctccgcgtgcccaagcccaacaccattgagctc
atcgccatggatctgccaatggtcagcggggatcgcatccactgcttggacatccttttt
gccttcaccaagcgggtcctgggagatagcggggagttagacatccttcggcaacagatg
gaggagaggttcgtggcatccaatccttccaaagtgtcttatgagccaatcacgaccacg
ctgcggcgcaagcaggaagaggtatcagcagtggtcctgcagcgcgcctaccggggacat
ttagccaggcggggcttcatctgcaaaaagacaacttccaataagctggagaatggaggc
acacaccgggagaaaaaagagagcaccccgtccacagcctccctcccctcctatgacagt
gtgactaaacccgagaaggagaaacagcaacgggcggaggaaggacgaagggaaagagcc
aaaagacaaaaagaggtcagagaatccaagtgttag
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integrated database retrieval system
