Cervus canadensis (wapiti): 122427677
Help
Entry
122427677 CDS
T07554
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122427677 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccad03041
]
122427677 (PRPF40B)
Spliceosome [BR:
ccad03041
]
Complex A
U1 snRNP components
U1 related factors
122427677 (PRPF40B)
Complex B
122427677 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
122427677
NCBI-ProteinID:
XP_043303252
LinkDB
All DBs
Position
25:25717518..25737888
Genome browser
AA seq
909 aa
AA seq
DB search
MKTRSNLLFIRRVSVPESGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQ
RPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASS
AVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDT
GKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAGKQQQPQTLQPQPPQPQPDPPPVPPGP
TLLPTGLLEPEPGGSEDCTVSEAAQPLEQGFPQQPEEGPSSSAGQHQPPQQEEEESKPEP
ERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNA
YKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERD
RKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSF
AQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHE
TGQLHSMSTWMELYPAVSTDIRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDIL
KDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRL
RRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETE
CQHLHSKGRKHGRKGKKHHRKRSHSPSVSWRGSESGDEELPPPSLRPPKRRRRNPSESGS
EPSSSLDSVESGGAALGGRGSPSSRLLLGSDHGLRKAKKPKKKTKKRRHKSNSPESETDP
EEKAAKESDEKEPEQDKDRDLRRAELPNRSPAFGIKKEKTGWDTSESELSEGELERRRRT
LLQQLDDHQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccagaagtaaccttctgttcatcaggagagtgtcggttcccgagtctggtccc
cggcccccagcagcgcctgcccccttcccaccggggccccccatgatgccaccacccttc
atgcctcctccaggaatccccccaccttttcctccaatggggctccctcccatgagtcag
agaccaccagccatccccccaatgccacctggcatcatgcccccaatgctcccaccaatg
ggggcaccaccaccactcacacagataccaggaatggtacctcccatgatgccaggaatg
ctgatgccagcagtgcccgtcaccgcagcgacggctccgggtgcggacaccgccagctct
gctgtggctgggacaggccctccgagggcactgtggagtgagcatgtggcccctgatggg
cgcatctactactacaatgctgacgacaagcagtccgtgtgggagaagcccagcgtgctc
aagtccaaggcagagctcctgctgtcccagtgtccctggaaagagtacaagtcggacaca
ggcaaaccttactactacaacaatcagagtaaggagtcccgctggacccggcccaaggac
ctggatgacttggaggctctagtcaaacaagaggctgcagggaaacagcagcagccacag
acactacagccacagcctcctcagcctcagcccgatcccccacctgtgccgcctgggccc
accttgctgcccacaggcctcctagaacctgagccaggtgggagtgaagattgcactgtg
tcagaggctgcccagcccctggagcaggggttcccgcagcagccagaggagggccccagc
agttctgctggacagcatcagccaccgcaacaagaggaagaagaatcaaaaccggagccg
gagcggtctggtctcagttggagtaaccgggagaaggcaaagcaggccttcaaggagctg
ctgagggacaaggctgtcccctccaatgcttcgtgggaacaggccatgaagatggtggtc
actgacccccgttacagtgccttgcccaaactgagtgagaaaaagcaggcattcaatgcc
tacaaagcacagcgggagaaggaggagaaggaagaggcccggctaagagccaaggaggcc
aagcagaccttgcagcatttcctggagcagcatgaacgcatgacctccaccacccgctac
cggcgggcagaacagacctttggggagctggaggtctgggctgtggtccctgagagggat
cgaaaagaggtttatgatgatgtcctcttcttcctggccaagaaggagaaggaacaggct
aagcagctgcggcgccgcaacatccaggccctgaagagcatcctagatgggatgagtagt
gtcaacttccaaaccacctggtcccaggcccagcagtacctcatggataaccccagcttt
gctcaggaccatcagctgcagaacatggacaaggaagatgcgctgatctgctttgaggag
cacatccgagctttggagagggaggaggaggaggagcgagagcgagcccgacttcgggag
cggcgccagcagcgcaagaaccgggaggccttccagaccttcctggatgagctgcacgag
acagggcagctgcactccatgtccacctggatggagctttacccagcggtcagcactgac
atccgctttgccaacatgctgggccagccgggctccacccctctggacttgttcaagttc
tatgtggaagagttgaaggcacgattccatgatgagaagaagatcataaaggacatcctt
aaggaccggggcttctgcgtggaggtgaacacagccttcgaggacttcgcccacgtcata
agctttgacaagagggctgctgcgctggatgcaggcaacatcaagctgactttcaatagt
ctgctggagaaagcagaggcacgcgagagagagcgggagaaggaggaggcccggcggctg
cggcgcagggaagctgccttccgaagcatgctgaggcaggctgtgcctgctctggagctg
ggcacggcctgggaagaggtccgtgagcgctttgtgtgcgactcagcctttgagcagatc
accctggagtcggagcggatccggctctttcgggagttcctgcaggtactggagacggaa
tgccagcacctccacagcaaaggccggaagcacggcagaaagggcaagaagcaccatcgc
aagcgttcccactcgccttcagtgagttggcggggctctgagtcaggagacgaggagctg
cccccgccctctctccggccccccaagcggaggcgacggaacccctcggagtcaggctct
gagccctcttcctcacttgattctgttgaaagtgggggtgctgcccttggaggacggggt
tccccctcctctcgccttctcctcggatcagatcatggtcttcggaaagccaagaaacca
aaaaagaaaactaagaagagaagacacaagtcgaacagtcccgagagcgagacagaccct
gaggagaaagctgccaaggagagtgatgagaaagaaccagaacaggacaaggacagggac
ctccggcgggcagagctccctaaccgctccccagcctttgggatcaagaaggagaagacg
ggctgggacacgtcggaaagcgagctgagcgagggggagctggaaagacggcggcggacg
ctcttgcagcagctggacgaccaccagtga
DBGET
integrated database retrieval system
