Cervus canadensis (wapiti): 122427687
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Entry
122427687 CDS
T07554
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03082
ATP-dependent chromatin remodeling
ccad04714
Thermogenesis
ccad05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122427687 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
122427687 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
122427687 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122427687 (SMARCD1)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122427687 (SMARCD1)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122427687 (SMARCD1)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122427687 (SMARCD1)
PBAF complex
122427687 (SMARCD1)
GBAF(ncBAF) complex
122427687 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
122427687
NCBI-ProteinID:
XP_043303294
LinkDB
All DBs
Position
25:26126313..26138516
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggcgccggagcctcagga
ggggcgggcgcggcggctgccctgggcccgggcgggacaccggggcctccggtgcgaatg
ggcccggcgccgggtcaagggctataccgctccccgatgcctggagcggcctatccgaga
ccaggtatgctaccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcgcctcagcagatccagcaggtccagcagcaggcggtccaaaatcggaac
cacaatgcaaaaaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgctgaggatggg
gaagggacggtggcttcctgggaacttcgggtagaaggacggctcctggaggattcagct
ttgtccaaatatgatgccaccaaacaaaagaggaagttttcttctttttttaaatccttg
gtgattgaactggacaaagacctgtatggaccagacaaccatctggtagaatggcacagg
accgccactacccaggagacggatggcttccaggtgaagcggccgggagatgtgaatgta
cgatgtactgtcctgctgatgctggattaccagcctcctcagtttaaattagaccctcgt
ctggctcggctactgggcattcacacccagacccgtccggtgatcattcaagcactgtgg
caatatattaagacacacaagctccaggacccacatgagcgggagtttgtcatttgtgac
aagtacctccagcagatctttgagtctcaacgtatgaagttttcagagattccccaacgg
ctccatgccttgcttatgccacctgagcccattatcattaatcatgtcatcagtgttgac
ccgaatgatcagaaaaagacagcttgttatgacattgatgtggaagtggatgataccttg
aagacccagatgaattcttttctgctgtctactgccagccagcaggagattgctactcta
gacaacaagatccacgagacaatagaaactatcaatcagctgaagacccagcgggagttc
atgctgagctttgccagagaccctcagggtttcatcaatgactggcttcagtcccagtgc
cgggacctcaagaccatgactgatgtggtgggtaacccagaggaggaacgccgagcagag
ttctacttccagccttgggcccaggaggctgtgtgtcgatatttctactccaaggtgcag
cagagacgacaagaattagagcaagccctgggaatccgaaatacatag
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integrated database retrieval system
