Cervus canadensis (wapiti): 122427761
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Entry
122427761 CDS
T07554
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03082
ATP-dependent chromatin remodeling
ccad05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122427761 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
122427761 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122427761 (ARID2)
03021 Transcription machinery [BR:
ccad03021
]
122427761 (ARID2)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122427761 (ARID2)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Helix-turn-helix
ARID
122427761 (ARID2)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122427761 (ARID2)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
122427761 (ARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
122427761
NCBI-ProteinID:
XP_043303374
LinkDB
All DBs
Position
25:21753138..21933352
Genome browser
AA seq
1835 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPAGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSNNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVPDVSPSPSPAGIPHGPQTVGNHFQRTPITNQSS
SLTATQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQNAPVTVIQNKAPIPCEVVKATVIQ
NSIPQTAVPVSIAVGGGAAQSSVVQNHSSGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQAVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
QPQDTVIIAPPQYVTTSTSNIVSATSVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQAV
QLTGQPNITPSSSPSPVPAATNQVPTAMSSSSTPQPQGPPPTVSQMLSVKRQQQQQHSPA
PPQQVQVQVQQPQQVQMQVQPQQANAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILPA
PQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPTGGVQ
TVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNTTQLIAPAGI
TMSGTQAGVGLQVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHER
KIEVMENPSCRRGTTNTSNGDTKENEMQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCSL
ISNGPSLELGENGASGKQNSEQMDVQDLKSDLRKPLVNGICDFDKGDGSHLSKNIPNHKT
SNHVGNGEISPMEPQGTLDATQQDTAKGDQLERTSNGPILTLGVSPSGSSIQEASNVATQ
QFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSATSVIQGHQIIAVPHSGSRVSHPPALL
SDVRSTNGTAECKTVKRPAEDNDRETVTGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
DPSTVAKVAIESAAQQKQQHPPAYVQNVVPQSTPVTPSPAVQVQSQPNSSQPSPLTASSQ
HGEPVRKPGHNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPAVGGTGSTPRAQKAIVNHPSAA
LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgtggaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaggttcatcactttggggaggatgatgatgaggtaccagcgggcaaccccaaaccg
cagcttcctattggtgcaatcccatcttcctacaactaccagcagcacagtgtgtcagat
tatctccgtcaaagttatgggctatctatggacttcaattcgccaaatgattataataaa
ctggtgctttcactattatctggactcccaaatgaagtggactttgctattaatgtatgc
actctcctgtcaaatgaaagcaaacatgtcatgcaacttgaaaaagaccctaaaatcatc
acattattacttgctaatgccggggtgtttgacgacactttaggatccttttctactgta
tttggagaagaatggaaggagaagactgatagagattttgttaagttttggaaagacatt
gttgatgataatgaagtacgtgacctcatatctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgat
attgaaggacaacgggtacttcagattgcagtgattttgcgaaatctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgtacctgtctccgtttcctattactttctgca
catagtcattttatatctctaaggcagttaggccttgacacattaggaaatattgcagct
gagcttttattggatcctgttgatttcaaaactactcacctgatgtttcatactgttaca
aaatgcctaatgtcaagggatagatttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaagataatggtgttttgatttgtgaatatgttgatcaggactcatac
agagagatcatttgtcatctcactttacctgatgtgctgctcgtaatctcaacacttgag
gtgctatatatgctcacagaaatgggagatgtagcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttctatggatattcagatgtttggcccagat
gcactggctgcagtgaaactcgtcgaacatccaagttccagtcatcaagttttatctgaa
attagaccacaagctatagagcaagtccaaacgcagacccatgtagcatctgccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattctgagtacctatcaacttgcagtaaattggctcgtggtgga
atcctaacatcaactggattttataaatgtcttagaacagtctttccaaatcatacagtg
aagagagtggaggattccagtaacaatgggcaggcgcatattcatgtagtaggagtaaaa
cgtagggctatcccacttcccattcagatgtactatcagcagcaacctgtttctactccc
gttgttcgtgttgattctgtacctgatgtatctccaagtccttcacccgcaggaatccct
catggaccacaaactgtaggaaaccattttcagaggactcctattaccaaccaatcttca
agtttgactgcaacacaaatgtcttttccagtacaaggtgttcatactgtggcacagact
gtttcaagaattccaccaaatccttcagttcatacccaccagcagcaaaatgctccggtg
actgtcattcaaaataaagctccaattccttgtgaagtcgttaaggctacagtaatccag
aactctataccccagacagcggttcctgttagcattgctgtgggaggaggagctgcacag
agttctgtggttcagaatcatagttcagggccacagcctgttacagttgtcaattcccag
acactgcttcaccatccgtcagtaattccacagcaatctccattacacacagtggtaccg
gggcagataccttctggcactcctgttacagtgattcagcaggctgtcccacagagtcat
atatttggcagagttcagaacataccagcatgtacttctacagtttcacagggtcaacag
ttaatcaccacgtcaccccaacctgtacaaacttcatctcagcagacatcagctggtagc
cagccacaggacactgttatcatagcacccccacagtatgtaacgacttctacatccaat
attgtctcagcaacttcagtacagaattttcaggtagctacaggacaaatggttaccatt
gctggtgtcccaagtccacaaccctcaagggtagggtttcaaaacattgcaccaaaacct
ctcccttctcagcaagtttcatcaacagtggtacaacagcctattcaacagccacagcag
ccaacccaacaaagtgtagtgattgtaagccagccagctcaacaaggtcaaacttatgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggccaggcagtt
cagctaactggacaaccaaacattactccatcttcctcaccatcacctgtcccagctgct
actaaccaggtccctactgccatgtcatcttcttccacccctcagccacagggaccacct
cctactgtcagtcaaatgctgtctgtgaaaaggcagcagcagcagcagcattcaccagca
cctccacagcaggtacaagtacaggttcagcagccacaacaagtacagatgcaagttcag
ccacagcaagcgaatgcaggagttggtcagcctgcttctggtgagtcgagtctgataaaa
cagctgctgcttccaaagcgtggtccttcaactcccggtggtaagcttattctcccggcg
ccacagattcctccccccaataatgcaagagctcctagtcctcaggtggtgtaccaggtg
gccaataaccaagcagcaggttttggagtgcaagggcaaactccagctcagcagctattg
gttgggcagcagaatgttcagttggtccaaagtgcaatgccacccaccgggggagtgcaa
accgtgcccatctcgaacttacaaatattgccaggcccgctgatctcaaatagcccagca
accattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaatacaagt
tttgcaactgcaactgtgagtcagggaaatacaactcagctcattgctccagcaggaatt
accatgagcgggacccaggcaggagttggacttcaggtgcaaacgcttccagccactcaa
gcatctccagctggacaatcatcttgtactactgctactcccccattcaaaggtgataaa
ataatttgccaaaaggaggaggaagcaaaagaagcaacaggtttacatgttcatgaacgt
aaaattgaagtcatggagaacccgtcctgcagacgaggaaccacaaacaccagcaatggg
gatacaaaggaaaatgaaatgcaggtgggaagtcttttaaatgggagaaaatacagtgac
tcaagtctacctccttcaaactcagggaaaattcaaagtgaggctaatcagtgctcactg
atcagtaatgggccatcgttagaattgggcgagaatggagcgtctggaaaacagaactca
gagcaaatggacgtgcaggatcttaaaagtgatttgagaaaacctctagttaatggaatc
tgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaatcacaaaact
tccaatcatgtaggaaatggtgagatatctccaatggaaccacaagggactttagatgcc
actcagcaagatactgccaaaggtgatcaactagaaagaacttctaatggacctatatta
actttgggtgtttcaccatctgggagcagtatacaggaggcctcaaatgtggcaacacag
cagtttagtggtactgatttgcctaatggacctctagcttcaagtttgaattcagatgtg
cctcagcaacgcccaagtgtagttgtctcaccacattctgcaacctctgttatacagggg
catcaaatcatagccgttccccactcaggatcaagagtgtcccatcctcctgccctgctg
tctgacgttcggtctacaaatggcacagcggaatgcaaaactgtaaagaggccagcagag
gataatgatagggaaacagtcacaggaattccaaataaagtgggagttagaattgttaca
atcagtgaccccaacaatgctggctgcagcgcaacgatggttgcggtgccagcaggagca
gacccaagcactgtggctaaagtagcgatagagagtgctgctcagcagaagcagcagcac
ccgcccgcgtacgtgcagaacgtggtcccgcagagcactccagtgacaccttcaccagct
gttcaagtccagagccagcctaacagctctcagccttctccgctcactgcgtccagtcag
catggagagccagtgaggaaacctgggcacaacttcatgtgtctgtggcagtcttgtaaa
aagtggtttcagaccccctcacaggttttctaccacgcagcaactgaacatggaggaaag
gacgtgtatccagggcagtgtctttgggaaggttgtgagccttttcaacggcagaggttc
tctttcatcactcacttacaggacaagcactgttcaaaggatgccctgcttgcaggatta
aaacaagatgaaccaggacaagcaggaagtcaaaaatcttctaccaagcagccagctgta
gggggcacaggctcaactcctcgagcacagaaggccattgtgaatcaccccagtgctgcc
ctcatggctctaaggagagggtcaagaaaccttgtctttcgagattttacagatgaaaaa
gagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaacattggt
aaatattcagaatgtggtcgcagattgttaaagagacatgaaaacaacttatcagtgcta
gccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaatttt
acagttcagagtaaagaacaagaaaaagactcagaaatgctgcagtga
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