Cervus canadensis (wapiti): 122427994
Help
Entry
122427994 CDS
T07554
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122427994 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122427994 (FIP1L1)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122427994 (FIP1L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
122427994
NCBI-ProteinID:
XP_043303527
LinkDB
All DBs
Position
26:2249538..2315851
Genome browser
AA seq
568 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETPENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTVGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYG
FNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQG
RTGNAEKETALPSTKAEFTSPPSLFKTGLPPSRRLPGAIDVIGQTITISRVEGRRRANEN
SNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPI
TVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVD
TSKQWDYYSRREKDRDRDRERDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYR
YREYAERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHK
KSKRSKEGKEAGSEPAPEQESTEATPAE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgccaatcct
ccatctggaattgaagatgaaactcctgaaaatggcgtacctaaaccgaaagtgactgag
actgaagatgatagtgacagcgacagtgatgatgatgaggacgatgttcacgtcactata
ggagacattaaaacaggagcaccacagtatgggagttacggtacagcacctgtaaatctt
aatatcaagaccggaggaagagtttatggaactactgtaggaacaaaggtcaaaggagta
gatcttgatgcacctggaagcattaatggagttccactcttggaggtagatttggattct
tttgaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattacggg
tttaatgaagatacctggaaggcttactgtgaaaaacagaagaggatacgaatggggctt
gaagttataccagttacctctactacaaataaaattacggccgaagactgtactatggaa
gttacaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcaggga
agaactggaaatgcagagaaggaaacagcgcttccatctacaaaagcagagtttacttct
cctccttctttgttcaagactggactcccaccaagcaggagattacctggggcaattgat
gttattggtcagactataactatcagccgagtagaaggaaggcgacgagcaaatgaaaac
agcaatatacaggtcctttctgaaagatctgctactgaagtagacaataattttagcaaa
ccacctccatttttccctccaggagctcctccaactcaccttccacctcctccatttctt
ccacctcctccaactgtcagcactgctccacctctgattccaccaccaggtattccaata
actgtaccacctccaggttttcctcctccgccaggtgctccgcctccttctctcatacca
acaatagaaagtggacattcctctggttatgatagtcgttctgcacgtgcttttccatat
ggcaatgttgcctttccccaccttcctggttctgctccttcatggcctagtcttgtggac
accagcaagcagtgggactattactcaagaagagagaaagaccgagacagagatcgggag
cgggaccgagagcgggaccgggaccgagacagggagagggagcgcacgcgggagcgggag
cgggagcgcgaccacagccccacgcccagcgtcttcaacagtgatgaagagcggtacaga
tacagggagtatgcagaaaggggctatgagcgccacagggcgagtcgggagaaagaagag
cggcacagagagagacggcacagagagaaagaggagaccagacacaagtcctcgcgcagc
aatagtagacgtcgccatgaaagtgaagaaggagacagtcataggagacacaagcacaaa
aaatctaaaagaagcaaagaaggaaaagaagctggcagtgagcctgcccctgaacaggag
agcaccgaagctacacctgcagaatag
DBGET
integrated database retrieval system
