Cervus canadensis (wapiti): 122428297
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Entry
122428297 CDS
T07554
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122428297 (SH3TC1)
Membrane trafficking [BR:
ccad04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122428297 (SH3TC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
SH3_1
TPR_7
SH3_2
Motif
Other DBs
NCBI-GeneID:
122428297
NCBI-ProteinID:
XP_043304154
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All DBs
Position
26:49886702..49919269
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AA seq
1318 aa
AA seq
DB search
MEGPAEPAPREKGPSGGSGDRRVREAAKSTSVVWEQPRPEEARATVRGGPCSATDTAPAA
GVSQRAAGPSPGQMGSCPTDLTLQLLAVRRKSGLPDPNLQQALRARLRLLENESCEVARA
LGELSARLLSIHSDQDRMVVTFKTFEEIWKFSTYHALGFTHHCLENLLMDEAFWLLEPNE
DQETAVQVQVDEDALRLAYESLLVQEGPFFVLCPDHHVRVKNGPQPFRRPPSGPQADMAA
AVDSSAPSPGTSSEEEGAAAATLEPLIPFHQWALRVPKDSVNDPLGGPVVPDVQLMAVGP
ALAVADCQGSGPEEMTFQSGDRIEILGAQVPSLPWCLGRHAASGQVGFVRTSLISVQGQA
SDLENVIFLSEEERSFFSREGRFSEEEARQLLRRTASTNVCTVYSLDTSEEAETQQQEEE
REMSPPCLNPEPREILKKVKNVLEQCKSCQGCPEEPGSPGVHRASSGASLPDTKEPSFCL
DAGDDWADPEALGSQLLFLDALGFQASFQGLYDLSPPTLSGVFGGFTDEEELVRRLAEAR
GVAKKAGLPMALARLCFLLGRLCVQRLKLSQARVYFEEALGVLGGRFGDLVLVAAVYTCL
ASVHLRQKNKEKCAQVVPKALALLLGTPGHVGSSEAESGLLTLALRRAIGGRSPQAEARA
CFLLAKHHARLKQPEEALPFLERLLLLLPGVAGTPGASWPTDCYLLLAGIYSQRCLPHLA
LSCVRVASMRARGSLGSALRSAALVLQNSPRLPVLPAQLAHYLRQALASPASGSGRALHG
PIYASLAQLYSQHGWQGRAIAFMTQAVETDARLGGRAVMDHVVALAWLHILHGQSPAALD
ILESVLEAAVATSEQEGLIANMTAIALKRTGRTRQAAEGYYRALRVARRLGRPRNEAVVL
ANFGALCLQAGAGGLAQHYLLEAVKLFSRLPSREGGPDFTRVLLRLGDLCIRRALARQAK
CYYEWAFLVAVEMDHWESQLLAVRRLCQFYSAVVPNEARCVVYHEFQLSLARRANDKGLE
GQLLETISQLYLALGTERAYRSALEYTKRSLGVFIDLLKRDKEAQAWLQAGKIYYVLRQG
ELVDLYIQAAQNAALYTGDPGLGLRLFEEAGDIFFNGTWDREKAVSFYRDRALPLAVSTG
SREAELRLCNKLSALLAEMETPQEGLEFAHTALALSLTLGDQLNQRVACHRLASLHRRLG
HGELAEHFYLKALALCTSPLEFDEETLYYVKVYLALGDIIFYDLKDPLDAAGYYQLALAA
AVDLGNKRAQMKLCTRLATIYHHSLLDREMSLFFYQKARTFATELRVRRGPLVPGPPS
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggagggcccagcggagccggcccctagggagaaggggccctcggggggcagtggtgac
cgcagggtccgggaagcggccaagagcacatccgtcgtctgggagcaaccacggcccgag
gaggccagggccaccgtccgagggggaccctgctctgctactgacactgctccggctgcc
ggcgtctctcagcgggctgctgggccctcccctggccagatggggtcctgccccacagac
ctgaccttgcagctgctggcggtgcggcggaagagcgggctgcccgaccccaacctgcaa
caggccctgcgggcccggctccgtctgctggagaatgaaagctgcgaggtggcccgcgcc
ctgggggagctgtcagccaggctgctgtccatccacagtgaccaggatcggatggtggtg
acgttcaagacgtttgaagaaatctggaagttttccacctaccatgctctcggcttcact
catcactgcctggagaacctgctcatggatgaggccttctggcttctcgagcccaacgag
gaccaggagacagccgtccaagtccaggtggatgaggacgccttgaggctggcgtacgag
agcctcctcgtccaggaagggcctttcttcgtcctgtgtcccgaccatcacgtgagagtg
aagaacggcccccagcccttcaggcggcctccgagcggtcctcaggcagacatggccgcg
gctgtggactcttcagccccaagtcctggcacgtcctcggaggaggagggggcagcagca
gccactctggagccgttgattccgttccatcagtgggctctcagggtccccaaggactcc
gtcaacgaccccctgggtggacccgtggtgccggacgtccagctgatggccgtaggccca
gccttggctgtagcggactgccagggctcagggcccgaagagatgacgttccaaagcggt
gaccgcatcgagatcctgggcgcccaggtgcccagcctgccctggtgcctgggccggcac
gcagcctccggccaggtcggatttgtgcggacgagcctcatcagtgtgcagggccaggcg
tctgacttggaaaatgtgatttttctcagtgaagaagaaaggtctttctttagccgtgag
gggcgcttttctgaggaggaggccaggcagctgctgagaaggacggccagcaccaatgtc
tgcacggtgtacagcctggacacgtcagaagaagctgagacgcagcagcaggaggaggaa
cgagaaatgtccccaccttgcctgaacccagagccacgggagatcctgaagaaggtgaag
aatgttctagaacaatgcaagtcctgccagggatgccccgaggaaccagggtcccccggt
gtccacagggcgtccagcggagcaagcctgccggacaccaaggaaccctccttctgcctg
gatgcgggagatgactgggctgaccccgaggccctgggctcccagctgctgttcctggat
gcactcgggttccaggccagtttccagggcctgtacgacctctccccacccacgctgagc
ggcgtgtttggcggcttcaccgacgaggaggagctggtcaggcggctggccgaggcccgc
ggggtggccaaaaaggccgggctgcccatggccctggctaggctctgcttcctgctggga
cggctgtgcgtgcagcggctgaagctgtcccaggcccgcgtgtacttcgaggaagccctg
ggcgtgctcgggggccgcttcggggacctggtcctggtggcggccgtgtacacctgcctg
gcctccgtccacctgcggcagaaaaacaaggagaagtgcgcacaggtggtgcccaaggcc
ttggccctgctcctggggacgcccggccacgttggcagctccgaggccgaatccggcctc
ctgaccctggccctgcggagggccatcggcggccgcagcccgcaagctgaggcccgggcc
tgcttcttgctggccaagcaccatgcccgcctcaagcagccggaggaggccctgcccttc
ctggagaggctgctgctgctgctccccggggtggcggggaccccgggcgcctcctggccc
acggactgctacctgctgctggcgggcatctacagccaaaggtgcctgccgcacctggcg
ctgagctgcgtcagggtggcctcgatgcgggcacggggctcgctgggcagcgcgctccgg
agcgcggccctggtcctgcagaacagcccgcgactccccgtgctgcctgcccagctcgct
cactacctccggcaggcgctggcctccccggcctccggctctgggcgggccctgcatggc
cccatctacgccagcctggcccagctatacagccagcacgggtggcagggcagggccatt
gccttcatgacgcaggccgtggagacagacgcccggctgggcggccgcgccgtcatggac
cacgtggtggccctggcctggctgcacatccttcacggacagagcccggcagccctggac
atcctggagtccgtcctggaggcggcagtggccacctcggagcaggagggcctgatcgcc
aacatgacggccatcgccctgaagaggaccggcaggacccggcaggcggccgagggctac
taccgcgccctgagggtggccaggcgcctgggccgcccgcggaatgaggcggtggtcctg
gccaacttcggggccctgtgtctgcaggctggcgccggcgggctggcgcagcactacctc
ctggaggccgtgaagctgttctcgcggctgcccagcagggagggcggcccggacttcacc
agggtgctgctgcggctgggggacctgtgcatccgcagggcgctcgcccggcaggccaag
tgctactacgaatgggcctttctggttgccgtggagatggaccactgggagagccagctg
ctcgccgtccggcggctctgtcaattctacagtgcggttgtgcccaacgaggcccggtgc
gtcgtctaccacgagttccagctctcgctggcccgcagggcgaacgacaaggggctggag
gggcagctcctggagaccataagccagctgtacctggccctgggcaccgagcgggcctac
aggtccgccctggaatacacgaagcgcagcctgggggtcttcatcgacctgctgaagagg
gacaaggaggcgcaggcctggctgcaggcggggaagatctactacgtgctgcggcagggt
gagctggtggacctgtacatccaggcggcgcagaacgccgccctgtacacgggggacccc
ggcctggggctgcggctcttcgaggaggccggagacatcttcttcaacgggacctgggat
cgcgagaaagcggtgtccttctaccgggaccgggcgctgcccctggcggtgtccacgggg
agccgggaggccgagctgcggctctgcaacaagctgtccgcgctgctggctgagatggag
acgccccaggagggcctggagtttgcccacacagccctggcgctcagcctcaccctgggg
gaccagctgaaccagcgggtggcctgccaccggctggcctctctgcaccgtcggctgggc
cacggcgagctggccgagcacttttacctcaaggcgctggcgctctgcacctcgccgctg
gagttcgacgaggagaccctgtactacgtgaaggtgtacctggctctcggcgacatcatc
ttctacgacctcaaggacccgctggacgcggccgggtactaccagctggcgctggcggcg
gccgtggacctgggcaacaagcgggcccagatgaagctctgcacgcgcctggccaccatc
taccaccactcgctcctcgaccgcgagatgtccctcttcttctaccagaaggcacggacc
ttcgccaccgagctccgcgtccgccggggccccctggtccccgggcccccgtcctga
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