Cervus canadensis (wapiti): 122428321
Help
Entry
122428321 CDS
T07554
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03020
RNA polymerase
ccad03420
Nucleotide excision repair
ccad05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122428321 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
122428321 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
122428321 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122428321 (POLR2B)
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122428321 (POLR2B)
Enzymes [BR:
ccad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122428321 (POLR2B)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122428321 (POLR2B)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122428321 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
122428321
NCBI-ProteinID:
XP_043304200
LinkDB
All DBs
Position
26:5555137..5599093
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgaggatatgcaatatgatgaagatgatgatgaaatcaccccagat
ttatggcaggaggcttgctggattgtaattagttcctattttgatgagaaaggtttggtg
agacaacaactggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgctccacctatagacctacaagctgaagctcagcatgctagtggagaagttgaggaa
ccgccaagatatttgctgaagtttgaacagatttacctgtccaagcccacccattgggaa
agagatggtgctccatcaccaatgatgccaaatgaggccagattaagaaatctcacgtac
tctgctccactttatgttgacataacaaaaacagtcattaaagaaggtgaagaacaactt
cagacacagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttac
tgcctattgaatggcttaaccgatcgtgatctttgtgagttaaatgaatgtcccttggat
cctggtggctacttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattctaaatatgcctacacaggagag
tgtagatcatgtctggagaattcttctcgacccacaagcactatctgggttagcatgctg
gcaagaggaggacagggtgcaaaaaagagtgctattggtcaacgtattgtggcaacccta
ccgtatatcaagcaagaagttcccatcattattgtgtttagagcgttaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gttaaaccatcactcgatgaagcttttgtcatccaagaacagaatgttgcactaaatttc
attggttcaagaggggcaaagcctggtgttaccaaagagaaaagaattaaatatgccaag
gaagtattacagaaagaaatgctccctcatgttggtgtcagtgatttttgtgagacaaag
aaagcttatttcttggggtacatggttcataggttgctgctagcagctttgggtagaaga
gaattagatgacagagatcactatggaaacaaaagattggaccttgctggaccactactt
gcattcttatttagaggaatgtttaagaatttgcttaaagaagtacggatctatgcccag
aagttcattgatcgtggaaaagatttcaacttggaattggcaattaaaacaaggattata
tctgatggcctaaaatattctttggctactggaaactggggtgatcaaaagaaagctcat
caagccagagctggagtatctcaggtattaaatcgcctgacttttgcatctactctttct
cacctgcgtcgtttaaattctcccattggtagagatggcaagctagcaaaacccagacaa
ttgcataatacattatggggaatggtgtgtcctgctgagaccccagagggtcatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagttggatctcaaccttctcca
attctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgttgggttggaatacataaagatcct
gaacagcttatgaacacactacggaagttgcggcgtcagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagagggagattcggatctatacagatgcaggccgt
atttgtagaccacttctaattgtggaaaaacaaaagctgcttttgaagaagagacacatt
gatcaattgaaagagagagaatataacaattacagttggcaggatcttgtggccagtggg
gtggtagaatatattgatactcttgaagaagaaacagtgatgcttgcaatgaccccagat
gatttacaggagaaagaagtagcttattgttccacatatacacactgtgaaattcatcca
tcaatgattcttggtgtctgtgcctctattattccttttcctgatcataaccagtcccct
agaaacacataccagtctgctatgggtaagcaggctatgggggtttatatcaccaacttt
catgttcgtatggatacgttggcccatgttctgtattatcctcaaaaaccacttgtgact
acacggtctatggaatatctgcgatttagagagctgccagcaggtatcaactcaattgta
gccattgcatcatacactgggtataatcaagaagactctgttatcatgaatcgttcagct
gtagaccgaggctttttcaggtctgttttctatcgatcatacaaagagcaggaatctaaa
aaaggctttgatcaagaagaagtttttgagaagcctacacgtgaaacttgccagggtatg
agacatgctatttatgataagctggatgatgatggtttgatagctcctggagtccgtgtc
tcaggagatgacgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaattg
gagggcactaacagacgctatacaaagagagactgcagcactttcctcaggaccagtgag
acgggcatcgtggatcaggtcatggtgacgctcaaccaagaagggtacaagttttgtaaa
ataagggtacgctctgttagaattccacagattggagacaaatttgctagtcgacatggt
caaaagggtacttgtggtattcagtatagacaggaggatatgcctttcacctgtgaaggt
atcacccctgatatcatcataaatccccatgccatcccctctcgtatgaccattggtcac
ttgattgaatgtcttcaagggaaggtatcagctaacaagggtgaaattggtgatgccact
ccattcaatgatgctgttaatgtgcagaagatttctaatcttttatctgattatggctac
catctcagaggaaatgaggtcttatacaatggattcactggtcgaaaaatcacatcacag
atttttattggccccacttattaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgctcggggtcctattcagattcttaatagacagccgatggagggtagatctcgt
gatggtggcttgcgttttggagaaatggaacgagactgtcagattgcccatggagcagcc
cagtttttaagggaaagattgtttgaggcatcagatccatatcaggttcatgtttgcaat
ctttgtggaataatggcaattgctaacaccaggacccatacatatgaatgcaggggctgc
cgaaataaaacccagatctctttggttcgaatgccttatgcgtgcaaactgctgtttcag
gagctcatgtcgatgagcattgcacctcgaatgatgagtgtttag
DBGET
integrated database retrieval system
