Cervus canadensis (wapiti): 122428392
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Entry
122428392 CDS
T07554
Symbol
NUP54
Name
(RefSeq) nucleoporin P54
KO
K14308
nuclear pore complex protein Nup54
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03013
Nucleocytoplasmic transport
ccad05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122428392 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122428392 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122428392 (NUP54)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122428392 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
DUF892
Motif
Other DBs
NCBI-GeneID:
122428392
NCBI-ProteinID:
XP_043304316
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All DBs
Position
26:complement(27862177..27907166)
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AA seq
509 aa
AA seq
DB search
MAFNFGTPSGTSGTAAATAAPAGGFGGFGTTSTTAGSAFSFSTPANTGTTGFFGSTQNKG
FGFGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQQTTLGGLFSQPTHAPAQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTLENPFCRFKAVGY
SCMPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKAQDQMTKQHQTRLDIISEDI
GELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQ
GELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaactttggtactccgtctggcacttcaggtaccgctgcagccaccgcggct
cccgcgggtgggtttggaggatttgggacaacgtctaccacagcgggttctgcattcagc
ttttctactccagctaacacaggcactactggattctttggcagtactcagaacaaaggt
tttggatttgggactggttttggcacgacaactggaactagtactggcttaggtactggt
ctggggaccggacttggatttggaggatttaatacgcagcagcagcagcagcaacagacg
acgttaggtggtctcttcagtcagcctacacacgctcctgcccagtccaaccagctgata
aatactgcaagtgccctttctgctccaacactactgggagatgagagagatgctattttg
gcaaaatggaatcaactacaagccttttggggaacaggaaaaggatatttcaacaataac
attccacccgtggaattcacactagaaaatcccttttgccggtttaaggctgtaggttat
agttgcatgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaa
gaaacagatattcgaagccagcagcagcaattggtagaatcattgcataaagttttggga
ggaaaccagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagaca
gaagttgtcatttacgttgttgagcgttctccgaatggtacttcaagaagagttccagct
acaacactatatgcccattttgaacaaaccaatattaaaacacaattacagcaacttggt
gtaaccctttctatgactaggacagagctctctcccgcacagatcaaacagcttttgcag
aatcctcctgctggtgttgatcctattatctgggaacaagccaaggtggataaccctgat
tctgaaaagttaattcctgtgccaatggtgggtttcaaagagctgcttcgaagactgaag
gctcaggaccagatgacgaagcagcatcagaccagattagatataatatctgaagatatt
ggtgaattacagaagaatcaaactacaaccatggccaaaattgcacaatacaagaggaaa
cttatggacctttcccacagaactttacaggtcctaatcaaacaggaaattcagaggaag
agtgggtatgccatccaagctgatgaagagcagttgcgagttcagctagatacaattcag
ggtgaactaaatgcccctactcagtttaagggccgactaaatgaactgatgtcccaaatc
aggatgcagaatcactttggagcagtcaaatctgaagaaagatattacatagacgccgat
ctgttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttgatt
agcatcataaaagatgacttagaagatatcaagttggtagaacacggattgaatgaaacc
atccacatcagaggtggtgtcttcagttga
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