KEGG   Cervus canadensis (wapiti): 122428392
Entry
122428392         CDS       T07554                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin P54
  KO
K14308  nuclear pore complex protein Nup54
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03013  Nucleocytoplasmic transport
ccad05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122428392 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122428392 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccad03019]
    122428392 (NUP54)
Messenger RNA biogenesis [BR:ccad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122428392 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C DUF892
Other DBs
NCBI-GeneID: 122428392
NCBI-ProteinID: XP_043304316
LinkDB
Position
26:complement(27862177..27907166)
AA seq 509 aa
MAFNFGTPSGTSGTAAATAAPAGGFGGFGTTSTTAGSAFSFSTPANTGTTGFFGSTQNKG
FGFGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQQTTLGGLFSQPTHAPAQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTLENPFCRFKAVGY
SCMPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKAQDQMTKQHQTRLDIISEDI
GELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQ
GELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggccttcaactttggtactccgtctggcacttcaggtaccgctgcagccaccgcggct
cccgcgggtgggtttggaggatttgggacaacgtctaccacagcgggttctgcattcagc
ttttctactccagctaacacaggcactactggattctttggcagtactcagaacaaaggt
tttggatttgggactggttttggcacgacaactggaactagtactggcttaggtactggt
ctggggaccggacttggatttggaggatttaatacgcagcagcagcagcagcaacagacg
acgttaggtggtctcttcagtcagcctacacacgctcctgcccagtccaaccagctgata
aatactgcaagtgccctttctgctccaacactactgggagatgagagagatgctattttg
gcaaaatggaatcaactacaagccttttggggaacaggaaaaggatatttcaacaataac
attccacccgtggaattcacactagaaaatcccttttgccggtttaaggctgtaggttat
agttgcatgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaa
gaaacagatattcgaagccagcagcagcaattggtagaatcattgcataaagttttggga
ggaaaccagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagaca
gaagttgtcatttacgttgttgagcgttctccgaatggtacttcaagaagagttccagct
acaacactatatgcccattttgaacaaaccaatattaaaacacaattacagcaacttggt
gtaaccctttctatgactaggacagagctctctcccgcacagatcaaacagcttttgcag
aatcctcctgctggtgttgatcctattatctgggaacaagccaaggtggataaccctgat
tctgaaaagttaattcctgtgccaatggtgggtttcaaagagctgcttcgaagactgaag
gctcaggaccagatgacgaagcagcatcagaccagattagatataatatctgaagatatt
ggtgaattacagaagaatcaaactacaaccatggccaaaattgcacaatacaagaggaaa
cttatggacctttcccacagaactttacaggtcctaatcaaacaggaaattcagaggaag
agtgggtatgccatccaagctgatgaagagcagttgcgagttcagctagatacaattcag
ggtgaactaaatgcccctactcagtttaagggccgactaaatgaactgatgtcccaaatc
aggatgcagaatcactttggagcagtcaaatctgaagaaagatattacatagacgccgat
ctgttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttgatt
agcatcataaaagatgacttagaagatatcaagttggtagaacacggattgaatgaaacc
atccacatcagaggtggtgtcttcagttga

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