Cervus canadensis (wapiti): 122428408
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Entry
122428408 CDS
T07554
Symbol
CLOCK
Name
(RefSeq) circadian locomoter output cycles protein kaput isoform X1
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04710
Circadian rhythm
ccad04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
122428408 (CLOCK)
09159 Environmental adaptation
04710 Circadian rhythm
122428408 (CLOCK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122428408 (CLOCK)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122428408 (CLOCK)
Enzymes [BR:
ccad01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
122428408 (CLOCK)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122428408 (CLOCK)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
122428408 (CLOCK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
bHLH_NPAS4
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
122428408
NCBI-ProteinID:
XP_043304337
LinkDB
All DBs
Position
26:complement(4067845..4199800)
Genome browser
AA seq
844 aa
AA seq
DB search
MLFTVSCSKMSSLVDRDDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSM
LPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDG
FFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESDSL
TPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVKFIGNFKSLNSVSTSAHNGFEGTIQRT
HRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYL
PFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYH
QWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLKEA
LERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKVAQRRSSF
SSQSINSQTVGQSLTQPVMSQSANLPVPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIEAN
IHRQQEELRKIQEQLQMVHGQGLQMFLQQSTPGLNFGSVQLSSGNSSNIQQLAPINMQSQ
VVQTNQIQSGMNTGHIGTTQHVIQQQSLQSTSSQQSQQNVLSGHSQQTSLPSQTQSALTA
PLYNTMVISQPTAGSMVQIPSSMPQNSSQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPVA
CGAVMVPSAMLMGQVVTAYPTFAPQHPQSQTLSVTQQQSPQEQPLPPGQQPPQAQLPQPP
QQFLQTSRLLHGNPSAQLILSAAFPLQQSTFPQSHHQQHQSQQQQQLSRHRTESLTDPSK
VQPQ
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttaccgtaagctgtagtaaaatgagctcacttgttgacagagatgacggtagt
atttttgatgggttggtggaagaagatgacaaggacaaagcaaaaagagtatctagaaac
aaatctgaaaagaaacgtagagatcagtttaatgttctcattaaagaactgggatccatg
cttcctggtaatgctagaaagatggacaaatctactgttctacagaagagcatcgatttt
ttacgaaagcataaagaaatcactgcacagtcagacgctagtgagattcgacaggactgg
aaacctacattccttagtaatgaagagtttacacaattaatgctagaggctcttgatggt
ttttttttagcaatcatgacagatggaagcataatatatgtgtctgagagtgtaacttca
ttgcttgaacatttaccgtcagatcttgtggatcaaagtatatttaattttatcccagag
ggggaacattcagaggtttataaaatactctctacccatctgctggaaagtgattcatta
actcctgaatatttaaaatcaaaaaatcagttagaattttgttgtcatatgcttcgagga
actatagacccaaaggagccatctacttatgaatatgtgaaatttataggaaatttcaaa
tctttaaacagtgtatccacctcagcacacaatggttttgaaggaacaatacaacgcaca
cataggccttcttacgaagatagagtttgttttgtagctactgtcagattagctacacct
cagttcatcaaggaaatgtgcactgttgaagaacctaatgaagagtttacatctagacat
agtttagagtggaagtttctatttctagatcacagggcaccacccataataggatatttg
ccatttgaagttctgggaacatcaggctatgattactatcatgtggatgacctagaaaat
ttggcaaaatgtcatgagcacttaatgcaatacggaaaaggcaaatcttgttactatagg
ttcctgaccaaaggacagcagtggatttggcttcagactcattattatatcacttaccat
cagtggaattcaaggccagagtttattgtttgtactcataccgtagtaagttatgcagaa
gttagggctgagagacgccgagaacttggcattgaagagtctcttccagagacagctgct
gacaaaagccaagattctgggtctgataatcgtataaatacagtcagtctcaaggaagcg
ttggagaggtttgatcacagcccaactccttctgcttcctcccggagttcaagaaaatca
tctcacacagcagtctcggacccttcctctacaccaacaaagatcccaacagatactagc
actcctcccagacaacatttaccagctcatgaaaaggtggcacaaaggaggtcatcattt
agtagtcagtctataaattcccagactgttggtcagtcattaacacagcctgtgatgtct
caatctgcaaatttaccagttccacaaggcatgtcccagtttcagttctcagctcagtta
ggagccatgcagcatctcaaagaccaattggagcagcggactcggatgatagaggcgaat
attcatcggcaacaagaagaactaagaaaaattcaagaacagcttcaaatggttcatggt
caagggctgcagatgtttttacaacagtcaacccctggattgaattttggttctgttcaa
ctttcttctggaaattcatctaatatccagcagcttgcacctataaatatgcaaagccag
gttgttcaaactaaccagattcaaagtggaatgaatactggacacattggcacaactcag
catgtgatacaacagcagagtttacaaagtacatcaagtcagcagagtcaacagaatgta
ctgagtgggcacagtcaacaaacatctcttcccagtcagacacagagcgctctcacagcc
ccactgtataacactatggtgatttctcagccgacggccggaagcatggtccagattcca
tctagtatgccacaaaacagttcccagagtgctgcagtaactacattcactcaggacaga
cagatcagattttctcaaggtcagcagcttgtgaccaaattggtgactgcccctgtggcc
tgtggggcggtcatggtgcccagcgccatgctcatgggtcaggtggtgactgcctacccc
accttcgcccctcagcacccgcagtcgcagacgctgtcagtcacgcagcagcagagcccc
caggagcagccgctcccgccaggtcagcaaccgcctcaggctcagctgcctcagccgccg
cagcagttcctacagacttctaggctgctccacgggaacccttcagctcagctgatcctc
tcggctgcgtttcctcttcagcagagcactttccctcagtcgcatcaccagcaacaccag
tcgcagcagcagcagcagctgagtcggcacaggactgaaagtttgacggatccttccaag
gtccaaccacagtag
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