Cervus canadensis (wapiti): 122428611
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Entry
122428611 CDS
T07554
Symbol
CD47
Name
(RefSeq) leukocyte surface antigen CD47 isoform X1
KO
K06266
CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04148
Efferocytosis
ccad04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122428611 (CD47)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122428611 (CD47)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccad02000
]
122428611 (CD47)
04515 Cell adhesion molecules [BR:
ccad04515
]
122428611 (CD47)
04090 CD molecules [BR:
ccad04090
]
122428611 (CD47)
Transporters [BR:
ccad02000
]
Other transporters
Pores ion channels [TC:
1
]
122428611 (CD47)
Cell adhesion molecules [BR:
ccad04515
]
Immunoglobulin superfamily
Other
122428611 (CD47)
CD molecules [BR:
ccad04090
]
Proteins
122428611 (CD47)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD47
V-set_CD47
FIIND
DUF7413
DUF2165
DUF6018
Ig_3
DUF8468
Motif
Other DBs
NCBI-GeneID:
122428611
NCBI-ProteinID:
XP_043304551
LinkDB
All DBs
Position
27:complement(47951016..48012718)
Genome browser
AA seq
321 aa
AA seq
DB search
MWPLVVLLLLGSLRSGSAQLIFNVIKSVEYTVCNQTVVIPCFVNNVETKNVTELYVRWKF
KGENIFIFDGSQRMSKSSSNFSSAKITPSELLRGIASLKMDKSDAVSGNYTCEVTELSRE
GETIIELKYRVVSWFSPNENILIVIFPVLAILLFWGQFGIVTLKYKSNYTKEKAIFLLVA
GLLLTVLVIVGAFLLIPGEYSTKNASGLGLIVLPTVILILLHYCVFMIAMGMSSITISIL
ILQILGYVLSVVGFSLCVSECVPVHGPLLISGLGIIALAELLGLVYMKCVASNHRTIQPP
KKAVEEPLNAFKESKGMMNDE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccctggtcgtgcttctgctgctgggctcgctgcgcagcggttcagctcaacta
atatttaatgtaatcaaatctgtagaatataccgtatgcaatcaaaccgttgtcatccca
tgttttgttaataatgtggagacgaagaacgttactgaattgtatgtcagatggaaattc
aaaggagaaaacattttcatctttgatggaagtcagcggatgtccaagtccagcagtaac
ttttctagtgcaaaaatcacaccatcggaattactgcgtggcattgcctctttgaagatg
gataagagtgatgccgtctcaggaaactacacttgcgaagtaacagaattgagcagagaa
ggggaaaccatcatagaactaaaatatcgtgttgtttcatggttttctccaaatgaaaat
atcctcattgttattttcccagttttggctatacttctgttctggggacagtttggtatt
gtgacacttaaatataaatccaattatacgaaggagaaagccatttttctattagttgct
ggactactgctcactgtccttgtcattgttggagcctttcttttaatcccaggtgaatat
tcaacgaagaatgcttcgggacttggtttaattgtacttcctacagtaatattaatatta
cttcattactgtgtgtttatgatagctatggggatgtcctccatcaccatcagcatactg
atccttcagattctgggctatgtgctatctgtggtcggattcagcctctgtgtctcagaa
tgtgtcccagtgcatggtcctcttctgatttcaggtttgggtattatagctctagcagaa
ttacttggattagtttatatgaaatgtgttgcttccaatcataggactatacaacctcct
aagaaagctgtagaggaacctcttaatgcatttaaagaatcaaaagggatgatgaacgat
gagtaa
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