Cervus canadensis (wapiti): 122428781
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Entry
122428781 CDS
T07554
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad00562
Inositol phosphate metabolism
ccad01100
Metabolic pathways
ccad04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
122428781 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
122428781 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122428781 (SYNJ1)
Enzymes [BR:
ccad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
122428781 (SYNJ1)
Membrane trafficking [BR:
ccad04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
122428781 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
Motif
Other DBs
NCBI-GeneID:
122428781
NCBI-ProteinID:
XP_043304815
LinkDB
All DBs
Position
27:2062511..2151678
Genome browser
AA seq
1574 aa
AA seq
DB search
MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAY
GLLGVLRLNLGDIMLHYLVLVTGCMSVGKIQESEVFRVTSTEFMSLRVDSSDEDRISEVR
KVLNSGNFYFAWSASGVSLDLSLNAHRSVQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD
DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVN
LLGSKEGEHMLSKAFQSHLKASEHAADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLD
YGIFHFDGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLTKQLEALGLAEKPQLVTR
FQEVFRSMWSVNGDSISKIYAGTGALEGKAKAGKLKDGARSVSRTIQNNFFDSSKQEAID
VLLLGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKSMCENFYKYSKPKKIRVCV
GTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPMDIFAIGFEEMVELNA
GNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
VKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNDDFVEIARKLSFPMGR
LLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGK
VTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKI
LYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQNIYKEVIAVQGPPDGTVL
VSIKSSLPENNFFNDALIDELLQQFTNFGEVILIRFVEDKMWVTFLEGSSALSVLNLNGK
ELLGRTITITLKSPDWIKTLEEEMSLEKINVPLPSSTSSTLLGEDAEVTADFDMEGDVDD
YSAEVEEILPQHLQPSSSSGLGTSPGSSPRTSPCQSPTISEGPVPSLPVRPSRAPSRTPG
PPASQNSPVDTLPATQLQQKESSQTLEPKRPPPPRPVAPPARPAPPQRPPPPSGARSPAP
ARKEFGGVGAPPSPGVARREMEAPKSPGTTRRDNLGRSQPPPQAGLPGPGLAGHSAARPI
IPPRAGVISAPQSHARASAGRLTPESQSKPSEVQKGPALLPEPLKPQAALPVPPSLPPPL
QKMQEPLIPVATPLTQAAPQLSLETPPQPPPRSRSSHSLPSEPPAQPQVKTNGVSAVRLD
SPLKSDPFEDLSLNLLAVSKAQPSVHTPNPRGLTPLPSATPSNTNTLSSVSCMPTMPPIP
ARSKSQENTRCSPNPFIPSSSSTNPFTDRTAVPGNPFRAESQESEATSWFSKEEPVAQSP
FSSLRPLGQNSSKPSSSLDGFKDSFDPQGPPALTVSNPKGWVTFEEEEDFGVTGKSGSTH
PDVFLGKQPSSSPGSKVTLGDDWGRSTSVSFCVLPARRPPPPPVPLLPPGTTPPTDPFTA
LASKASPTLDLTER
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagcaaaggatttcggatctatcacaaattggatcccccacctttcagcctc
atagtggaaaccaggcacaaggaagaatgtctcatgttcgagtctggggctgtagcggtg
ctctcatcagcggaaaaagaggcaatcaagggtacatactccaaagttctagatgcctat
ggacttttaggtgttttacgattaaatcttggtgatattatgttacattatctggtccta
gtcactggatgtatgtccgttggaaaaattcaagaatctgaagttttccgagttacttcc
actgaatttatgtcactgcgagttgattcttcggatgaggatcgcatttcggaagtgcga
aaagttttaaattcaggaaacttttattttgcatggtctgcatccggagtcagtttggat
ctgagtcttaatgcccaccgtagcgtgcaagaacacacaactgacaatagatttttctgg
aatcagtctttgcacttgcatctcaagcactacggtgtgaattgtgacgactggttatta
cgcctcatgtgtgggggagtagaaatcagaacaatttatgctgctcataaacaggcaaag
gcttgcctcatttccagactaagctgtgaacgagctgggaccaggtttaacgtccgggga
acaaatgatgatggtcacgtcgccaattttgtagaaacagaacaggttgtgtacttagat
gactctgtttcttccttcatacaaatccggggatctgtcccattgttctgggagcaacca
ggattgcaggtgggatcccatcgtgttcgtatgtcaaggggatttgaagccaatgcaccc
gcttttgacaggcattttaggacacttaagaatttgtatggtaaacaaataatagtaaat
ctgcttggatctaaggaaggtgaacatatgctaagtaaggctttccagagtcatctgaaa
gcttctgaacatgctgctgatatccagatggtgaattttgactatcatcaaatggttaaa
ggaggaaaggcagaaaaattacatagtgttcttaaacctcaagtccaaaagtttctggat
tatggaatttttcattttgatggaagtgaagttcaaaggtgccagagtggtacagttcga
acaaactgcttggattgtcttgacagaacaaatagtgtgcaggcattccttggattggag
atgctgactaaacagttggaagctcttggtttagctgaaaagcctcagttggtgactcgc
tttcaagaagtttttcgatcaatgtggtctgtgaatggtgattcaataagtaagatttat
gctggaactggagcccttgaaggaaaggctaaggctggaaagttaaaagatggtgctcgt
tcagttagtagaacaattcagaataacttctttgacagctccaagcaagaagcaattgat
gttttgctcctgggaaatactctaaatagtgatttagctgacaaagctcgagccctttta
actactggaagtttgcgtgtttctgaacagacattacagtcagcatcttctaaagtccta
aagagcatgtgtgagaatttctacaagtattcaaagcccaagaaaattcgagtatgtgtg
ggcacctggaacgtgaatggcgggaaacagtttcgcagcatagcttttaagaatcagacc
cttacggactggcttcttgatgcccccaagttagctggcatccaggagtttcaagataaa
agaagtaaaccaatggatatatttgcaattggttttgaggaaatggtagagttgaatgct
ggaaacattgtgaatgcaagcacaacaaatcagaaactctgggctgtggaacttcagaag
accatctccagagacaacaagtatgtgctgctggcctctgagcagttggtgggtgtctgt
ctgtttgtttttatcagaccacagcacgctccattcatcagggatgttgcggttgatact
gtgaaaactggaatgggaggcgcaactggaaataagggagcagttgcaatacgaatgctg
ttccacaccacaagcctctgctttgtctgcagccacttcgctgcaggacagtcccaagtc
aaagaacgaaatgacgattttgtagaaatagcgcggaagttgagttttccaatgggaagg
ctgctcttctcccatgactatgtgttttggtgtggtgatttcaactaccgaatcgatctc
cctaatgaggaagtgaaagagcttatcagacagcaaaactgggattctcttattgcagga
gatcagcttatcaatcagaaaaatgctggacagatttttagaggatttttagaaggaaaa
gtgacctttgctccaacgtataaatatgacttgttttctgatgactacgatactagtgaa
aagtgccgcacccctgcatggacagaccgtgtcctctggagaagacggaagtggcctttt
gatagatcagctgaagatttagatctcctaaatgctagttttcaagatgaaagcaaaatc
ctctacacatggactcctggcactttgctgcactacggaagggccgagctgaagacttct
gaccataggcctgtcgttgccctgatcgatattgatatatttgaagttgaagctgaagag
aggcaaaacatttataaagaagtaatcgcagttcagggtccaccagatggtacggtgttg
gtctcaatcaaaagctctttaccagaaaataattttttcaacgatgctttgattgatgag
cttttacagcagtttacaaattttggtgaagttatactcataagatttgtggaagataaa
atgtgggttacgtttttggagggaagctctgccttgagtgttctgaacctgaatgggaaa
gagttattgggtaggactataacaattactttaaaaagtccagattggatcaaaactttg
gaagaagaaatgagcttagagaaaatcaacgtccccttgccatcatcaaccagctccacc
ctcctaggtgaagacgcagaggtcactgccgacttcgatatggaaggtgatgtggatgac
tatagtgctgaggtagaggagatccttcctcagcatctccagccgtcttccagttctggc
cttggcacgtcccccggttcttcaccccggaccagtccctgccagtcacctaccatatcg
gagggacccgtgccttccctcccagtgagaccaagtcgagctccgtccagaacacccggg
ccccccgcttcacaaaattctcctgttgacaccctgccggcaacacagctgcagcagaaa
gagtcttcccagaccctggaacccaagcggcctccccctccccgcccggttgctcctccc
gcacgtccagctcccccacaacgaccgcctccgccttcaggggctaggagtcctgcacct
gctagaaaagagtttggaggtgttggagcccctcccagtccgggggtagctaggcgagag
atggaagcacccaaaagccctggaacaacacggagagataatctaggacgcagccagcct
ccacctcaagccggactgccaggcccgggacttgccggacacagtgcagccagaccgatt
attccgccccgtgctggagtcatcagcgccccccagagccacgcacgggcatctgctggg
agactgactcctgaaagccaaagcaaaccctcagaagtacagaaagggccagctcttctt
cctgaacccctgaagcctcaggccgcccttcctgtgccgccttctctgccgccacctctt
cagaagatgcaggagcctctcatcccggtggccacacctctgacccaggctgccccgcag
ctcagcctggaaacacccccacagccgccccctcggagcaggtcgtcccacagcttgcct
tctgaacctccagcacagccgcaggtgaaaacaaatggagtctccgccgtcagactggac
tcgccattaaagagtgacccatttgaagacttgtcattgaacctgcttgctgtatcaaag
gctcagccgtctgttcacaccccaaacccaagggggttgacaccgttgccttctgcaacc
ccaagtaacacgaacactctgagttctgtaagctgcatgccgacaatgcctccaattcca
gcccggagtaaatcccaggaaaacacgcgatgttccccaaatccattcatcccaagctca
agcagcacaaatcctttcactgataggactgccgttcccggaaacccatttcgagctgag
tctcaagaatcagaggccacttcatggttttccaaagaagagcctgttgctcagagtcca
ttctcttcgctgaggcctctgggtcagaacagtagcaagccttcatcctccctggatggg
tttaaggacagttttgatccgcagggcccgcctgcactaacagtcagcaaccccaaagga
tgggtaaccttcgaggaggaagaggactttggtgtgacagggaagtcagggtccactcat
ccagatgttttcctgggtaagcagccgagctcatctcctggctccaaggtgacgcttggt
gatgactggggtagaagtaccagtgtgtctttctgtgtgttgccagcaagaagaccaccc
ccaccgcctgtccctctgctcccacctggcaccacccctcccacagaccctttcacagcc
ctggcctctaaggcatcacccacactagacttgacagaaagataa
DBGET
integrated database retrieval system
