Cervus canadensis (wapiti): 122428807
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Entry
122428807 CDS
T07554
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad05016
Huntington disease
ccad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
122428807 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
122428807 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccad03037
]
122428807 (IFT57)
Cilium and associated proteins [BR:
ccad03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
122428807 (IFT57)
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Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
BLOC1_2
DUF512
Mod_r
SpecificRecomb
DUF1664
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
122428807
NCBI-ProteinID:
XP_043304851
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Position
27:complement(48095997..48170855)
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AA seq
430 aa
AA seq
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MAAAAAAVVTPSGLEDEVSRSRGEGAGDVVVERGPGAAYHMFVVMEDLVEKLKLLRYEED
LLRKNNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKAGRPFEQPQEYDDPNAIISNIL
SELRSFGRTADFPPSKLKSGYGEHVCYVLDCLAEEALKYIGFTWKRPAYPVEELEEETVA
EDDAELTLNKVDEEFVDEETDNEENFIDLNVLKAQTYRLDMNEPAKQEDILESTTDAAEW
SLEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEISRTLEK
IGSREKYINSQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQE
MEEKGSSMTDGAPLVKIRQSLTKLKQEAAQMDVRVGVVEHTLLQSQLKERSDMTRDMHAA
AVPGPAAGPH
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgccgccgccgccgtggtcaccccgtcgggtttggaggatgaggtgtctcgg
tcccgcggcgaaggagcgggggatgtggtggtggagcgggggcccggcgcggcctaccac
atgtttgtggtgatggaggacctggtggagaagctgaagttgctccgctatgaggaggat
ctcctccggaagaacaacctgaagcccccgtccagacactattttgcactgcctaccaat
cccggggaacagttctacatgttttgcacccttgctgcctggctgattaacaaggcggga
cgcccttttgagcagcctcaagaatatgatgaccctaatgcaataatatctaatatacta
tctgagcttcgatcgtttggaagaactgcagattttcctccttcaaaattaaagtcgggt
tatggagagcatgtatgctatgtccttgactgtttagctgaagaagcattaaaatatatt
ggtttcacttggaaaagaccagcatacccagtggaagaattagaagaagaaactgttgca
gaagatgatgcagaattaacattaaataaagtagatgaagaatttgtggatgaggagaca
gacaacgaagaaaactttattgatctcaacgttttgaaggcccagacctatcgcttggat
atgaacgagcctgccaaacaagaagatattttggaatctacaacagatgctgcggaatgg
agtctggaagtagaacgtgtactaccacaactgaaagtcacgatcaggactgacaataag
gattggagaatccacgttgaccaaatgcaccagcacaaaagtgggattgagtctgctcta
aaggaaaccaagggatttttggacaaacttcataatgaaattagtaggactctggaaaag
atcggcagccgagaaaagtacatcaacagtcagctcgagcacttggttcaggaataccgc
gcagctcaagcccagctgagcgaggcacgggagcgttaccagcagggaaacggtggagtg
actgagaggacccgactcctgtccgaggtcacagaagagctagaaaaggtgaaacaagaa
atggaagaaaaaggcagcagcatgactgatggtgcccctctggtgaagattagacagagc
ctcacgaagctgaagcaggaagccgcgcagatggacgtcagggtcggggtcgtggagcac
acgctgctgcagtcacagctgaaggagaggtccgacatgacgagagacatgcacgccgcc
gccgtcccggggcccgcggcgggccctcactga
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