Cervus canadensis (wapiti): 122428858
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Entry
122428858 CDS
T07554
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccad01009
]
122428858
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122428858
Protein phosphatases and associated proteins [BR:
ccad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122428858
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122428858
mRNA cycle factors
Stress granule specific factors
122428858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
122428858
NCBI-ProteinID:
XP_043304930
LinkDB
All DBs
Position
27:complement(13525035..13529160)
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AA seq
511 aa
AA seq
DB search
MANPKEKTPMCLVNELARFNRVQPQYKLLKERGPAHSKMFSVQLSLGEQTWESEGSSIKK
AQQAVANKALTESTLPKPVQKPPKSNVNNNPGSITPTVELNGLAMKRGEPAIYRPLDPKP
FPNYRANYNFRGMYNQRYHCPVPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQ
NEPIPEKSAQNCESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFV
TRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGP
EYGQGMNPISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKI
AKKNAAEAMLLQLGYKASTSLQDQLDKTGENKGWSGPKAGFPEPTSNTPKGILHLSPDVY
QEMEASRHKVISGTTLGYLSPKDMNQPSSSFFSISPTSSSSATIARELLMNGTSSTAEAI
GLKGSSPTPPCSPVQPSKQLEYLARIQGFQV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccccaaagagaaaactccaatgtgtctggtaaatgagttagcccgtttcaat
agagtccaaccccagtataaacttctgaaagaaagagggcctgctcattcgaagatgttc
tcagtgcaactgagtcttggggagcagacatgggaatccgaagggagcagtataaagaag
gcccagcaagccgtcgctaacaaagctttgacggaatccacgctccccaaaccagttcag
aagccacccaagagcaatgttaataataacccaggtagtataactccaactgtggaactg
aatgggcttgctatgaaaaggggagagcctgccatctacaggccattagacccaaagcct
ttccccaattatagagctaattacaactttcggggcatgtacaatcagaggtatcattgc
ccagtgcccaagatcttttatgttcagctgactgtaggaaataatgaattttttggggaa
gggaagactcgacaagccgctagacacaatgccgcgatgaaagcccttcaagcactgcag
aatgaacctattccagaaaaatcagctcagaattgcgaatcaggaaaagaaatggatgat
gacaaagatgcaaataagtctgagatcagcttagtgtttgaaattgctctgaagagaaat
atgcccgtcagttttgaggttattaaagaaagtggaccaccacacatgaaaagctttgtg
acccgggtgtcagtgggagagttctccgctgaaggagagggaaatagcaaaaaactctcc
aagaagcgtgctgcaaccactgtgctacaggagcttaagaaacttccacctctgcctgtg
gttgaaaagccaaaactattttttaaaaaacgccctaaaacaatagtaaaggctggacca
gaatatggtcaaggaatgaaccccattagccgcctggctcagattcaacaggccaaaaag
gaaaaggagccagattacgttttgctttcagaaagaggaatgcctcgacgtcgggaattt
gtgatgcaggtcaaggtaggcaatgaagttgctactggaacaggacctaataaaaagata
gccaaaaaaaatgctgcagaagctatgctgttacagcttggttataaagcgtccactagt
cttcaagatcagcttgacaagacaggggaaaacaaaggatggagtggtccaaaggctggg
tttcctgaaccaacaagtaacactccaaaaggaattcttcatttgtctcctgatgtttat
caagagatggaagccagccgccacaaagtaatctctggcacgactctaggctatttgtca
cccaaagatatgaaccaaccctcgagctctttcttcagtatatctcccacatcgagtagt
tcagctacaattgccagggaactccttatgaacggaacatcttctacagctgaagccata
ggtttaaaaggaagttctcctactcccccttgttctccagtacaaccttcaaaacagctg
gaatatttagcaaggattcaaggctttcaggtatga
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