Cervus canadensis (wapiti): 122429135
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Entry
122429135 CDS
T07554
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122429135 (TRERF1)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
122429135 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-C2H2_2
zf-met
Myb_DNA-bind_7
Zn_SUZ12
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
122429135
NCBI-ProteinID:
XP_043305295
LinkDB
All DBs
Position
28:complement(47273524..47480345)
Genome browser
AA seq
1223 aa
AA seq
DB search
MGDQQLYKTNHVAHGGENLFYQQPPLGVHGGLNHNYGNTVPGAGMDAPQASPISPHFPQD
TRDGLGLAVGSKNLGQVDTSRQGGWGGHTGPGNHVQLRGNLTNSNMMWGAPTQAEPTDGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPMEAPAPALPSRYQQASQQPHPGFTGGLSKPALQVGQHPSQGHLYYDYQQPL
AQMPVQGGQSLQAPQMLSQQMQQLQPHQYYPPQQQPHAGQQRVSMQEMQPPPQQQIRPPQ
PQPQPQARQGSMQIPQYYQSPPMIQPLPEPQQPQMHLQPPSYHRDPHQYTPEQAHAVQLI
QLGSVPQYYYQEPQQPYGHPMYQQSHLPQHQQPEDGQPKTYPGDRQAQAMLSSHGDLGPP
DTGMGDAASSDLNRASSALPHRPLLSPGSIHLNNMGSQHQQLSPSAVWPQMHLPDGRAQP
GSPESSGQPKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRASPSLKQEEGE
KAPAPPPQPQPPLPPPPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPSSQGFANSVAA
APSARDKPASSMSDDEMPVLVRMTLSPPHSPHGATPNPPAEIPKKHQPGAAKAEEALRSA
PSEKKKFRHRPEPLFIPPPPSYTPNLAASHSGATLYQSQLRSPRVLGDHLLLDPAHELPP
YTPPPMLSPVRQGSGLFSNVLIAGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNLTVT
PGPGEQTVDVEPRINIGLRFQAEIPELQDVSALAKDTHRATLVWKPWPELENHDLQQRVE
NLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMAALEMLLLRKPVRLKCHPLANYHYAGS
DKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLSE
IIDDCVTSEEDEEVEEEEDPEEDRKSTREEESELPKSPEPPPGPVLAPAEGPPLQALGQP
SGSFICEMPNCGADCRCHVTPFLPQVFSSRQALNGHARIHGGTNQVTKARGAVPSGKQKA
GSGQSGYCSVKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQ
KAQKAAFAAEMAATIERTTGPVGPQGLLPLDQLSLIKPIKDVDLLDDDVVQQLGGVMAEA
EVVDTGLLLDDQASALLQGDTEL
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcagctgtacaagaccaaccacgtggcccacggtggtgagaaccttttc
taccaacagccaccacttggcgtccacggcgggctgaaccacaactatgggaatacagtg
cccggggctggaatggatgcccctcaagcatcacccatctccccccacttccctcaagac
actcgggatggtctaggcttggctgttggctccaaaaaccttggccaagtggatacctcg
aggcagggagggtggggaggccacacagggcctggaaaccacgtccagctacgtggcaac
ctcaccaactcgaacatgatgtggggggcgccgacccaggcggagcccactgatggctac
cagtacacctactcgcaggccagcgagatccggacccagaagctcaccagcggtgtcctg
cacaagctagactctttcacccaggtgtttgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccagtcggcggtgatggatggagcgcctgacagcgcc
ctccgccagttgctgtcccagaagcccatggaggccccagcaccggccctcccgtcccgc
taccagcaggcgtcccagcagcctcaccctggtttcaccggtgggctatccaaaccggct
ctccaggtcgggcagcacccgagccaagggcacctgtattatgactaccagcagccactg
gcccagatgccggtgcagggaggacagtcgctgcaggccccccagatgctatcccagcag
atgcagcagctgcagccgcatcagtattacccgccgcagcaacagccacacgctgggcag
cagcgggtgtccatgcaagaaatgcagccaccgccgcaacagcagattcgcccgccacag
ccccagccccagccgcaggcgcggcagggttcaatgcagatacctcagtattaccagtcc
ccacccatgatacagcctttgccagagccgcagcagccccagatgcacctgcagccccct
tcgtatcacagggacccccaccaatacaccccggagcaggcacacgcagtccagctaatt
cagctgggctccgtgccccagtactactaccaggagccccagcagccctacggccacccc
atgtaccagcagagccacctgcctcagcaccagcagcctgaggacggtcagcccaagact
tatccaggcgacaggcaggcccaggccatgctgagctcccacggggacctggggcctcca
gatacaggaatgggagacgcggccagctccgacctgaaccgggccagcagtgccctcccg
caccggccgctcctgtcccccggcagcatccacctcaacaacatggggtctcagcaccag
cagctgtctcccagtgccgtgtggccccagatgcacctacctgatggccgagcccagcca
gggtctcctgagtcaagcggccaacccaaaggagtgtttggggagcagtttgatgccaag
aacaagctgacatgctccatctgcctgaaggagttcaagagcctgcccgccctgaatggc
cacatgcggtcccatggggggatgagggcctcccccagcctcaaacaggaggaaggagag
aaggccccggcacctccgcctcagccccagccgccactgccgcctccgcctccgccgccg
ccacctcagctccctcccgaggcggaaagcctcacgcctatggtcatgcccgtgtctgtc
cctgtcaagcttctcccgcccaagcccagctctcagggcttcgccaacagcgtcgctgcc
gccccctcggccagagacaagccagccagctcgatgtcggacgacgagatgcccgtgctc
gtgaggatgaccctctctcccccacactcgccccacggggctacccccaacccgcctgct
gaaattcccaagaagcaccagccaggcgcggccaaagccgaggaagccctcaggagcgcg
ccatcggagaagaagaagttccggcaccggccggagccgctcttcatcccgccaccgccc
tcctacacgcccaacctcgccgcctcgcactcgggcgccaccctgtaccagagccagctg
cgctccccgcgggtgctgggcgaccacctgctcctggaccccgcccacgagctgcccccc
tacacgcccccgcccatgctcagcccggtgcgccagggctcggggctcttcagcaacgtg
ctcatcgccggccacggccccggcgcccacccgcagctgcccctcacgcccctgacgccc
acgccgcgcgtgctgctctgccgctccaacagcattgatggcagcaacctgacggtcacc
ccggggcctggagagcagaccgttgatgtcgaaccacgcatcaacattggcttgcgattc
caagcggagatcccagaactccaggatgtctctgccctggccaaggacacacacagggcc
acactagtatggaagccctggccagagctggaaaaccacgacctccagcaaagagtggag
aatctcctgaatttatgctgttcaagtgcgttgccaggtggagggaccaattctgaattt
gctttgcactctctcttcgaggccaaaggtgatgtgatggctgctctggaaatgctgctg
ttgcggaaaccagtcaggttaaaatgtcatcctttagcaaattaccactatgccggttcg
gacaagtggacctccctagaaagaaaactgtttaataaagcactagccacttacagcaaa
gactttatttttgtacagaagatggtgaagtccaagacggtggctcagtgtgtagagtac
tattacacgtggaaaaaaatcatgaggttggggaggaaacaccggacacggctctcagaa
atcatcgacgactgtgtgacaagtgaagaagatgaagaggtagaggaggaggaggatccg
gaagaagacaggaaatccacaagagaagaggagagtgaattgcccaagtctccggagccg
ccgccgggcccggtcctggctcccgcagaggggccaccgctgcaggccctgggccagccc
tcgggctccttcatctgtgaaatgcccaactgcggggcggactgtagatgtcatgtcact
ccctttcttccccaggtgttcagctcccggcaggcactgaacggccatgcccgcatccat
ggtggcaccaaccaggtgaccaaagctcggggcgctgttccctctgggaagcagaaggct
ggcagtggccagagcgggtactgctctgtgaagagctcacccgcccacagcaccaccagc
ggcgagacagaccccaccaccatcttcccctgcaaagagtgcggcaaagtcttcttcaag
atcaaaagccgaaacgcacacatgaaaactcacagacagcaggaggaacagcagaggcag
aaagcgcagaaggcggcgtttgcggccgagatggcagccacaatcgagaggactacgggg
ccggtggggccgcaggggctgctgcccctggaccagctgagtctgatcaaacccatcaag
gacgtggacctcctcgatgacgacgtcgtccagcagttaggaggcgtcatggcagaggcc
gaggtcgtggacaccggtctcctcctggatgatcaggcttcagctttgcttcagggtgac
acggaactctga
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integrated database retrieval system
