Cervus canadensis (wapiti): 122429139
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Entry
122429139 CDS
T07554
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122429139 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122429139 (PEX6)
Membrane trafficking [BR:
ccad04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
122429139 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_33
AAA_5
AAA_22
AAA_11
RuvB_N
nSTAND3
NPHP3_N
AAA_25
TsaE
RNA_helicase
TIP49
Mg_chelatase
AAA_19
AAA_28
AAA_30
Vps4_C
IstB_IS21
AAA_14
PEX6_4th
DUF815
SLFN-g3_helicase
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
122429139
NCBI-ProteinID:
XP_043305316
LinkDB
All DBs
Position
28:complement(47895958..47909454)
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AA seq
980 aa
AA seq
DB search
MALAVLRVLEPFPTETPPLTVLLPPGGPWPAAGLGLVLALRPAGESPAGPALLVAALEGP
GAGTEEQGPGPPQLLVSRALLQLLALGSGAWVRARPVRRPPSLGWALLGTSSGPGLGPRV
GPLLVRRGETLPVPGPRVLETRPALQGLLGPGTRLAVTELRGRAKLGPEAENSSRLPLPP
VVSSFAASGTVRRLRGVLGGTGDALGVSRSCLRSLGLFQGEWVWVTRAGESSNTSQPHLA
TVQVLEPRWDLSERLGAGSGQPGEPLADGLALVPATLAFNLGCDPLDVGELKIQRYLEGS
STPEDKGSCSVLPGPPFAKELHIEIVSSPHYSTNGNYDHVLYRHFQTPRAVQEGDVLCVP
TVGQVEILEGSPEKLPRWQEMFFKVKKTVGEAPDGQDRAYLADTTHTSLYLVGSTLSLVP
RLPSGDSTPWSSLSPPGLEALVTELCAALKPRLQPGGALLTGTGSVLLRGPPGSGKTTAV
TAACSRLGLHLLKVPCSSLCADSSGAVETKLQATFSRARCCRPVVLLLTAVDLLGRDRDG
LGEDARVVATLRHLLLDEDPLSSCPPLLVVATTSRAQDLPADMQTAFPHELEVPVLAEAQ
RLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACSRIKNSGWAGGLS
EEDEGELCAAGFPLLAEDFGQALEQLQAAHSQAIGAPRIPSVSWHDVGGLQEVKKEILET
IQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQ
SEENVREVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSTQ
DVFVIGATNRPDLLDPALLRPGRFDKLVFVGVNEDRASQLRVLSAITRKFRLEPSVSLVD
VLDHCPPQLTGADLYSLCSDAMTAALKRRVRDLEEGLEPGSSALLLTMEDLLQAAARLQP
SVSEHELLRYKRIQRKFAAC
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggcagtcttgcgagtcctggagcccttcccgaccgagacacccccgttgacg
gtgctgctgccgcccgggggcccgtggcctgcagcagggctgggcctagtactggcgctg
aggcctgcaggggagagcccggcgggtccggcgctgctggtggccgccctggagggaccc
ggcgcgggcaccgaagagcagggcccggggcccccgcagctgctggttagccgcgcgctg
ctgcagctcctggctctgggatccggggcgtgggtgcgggcgcggccggtgcggcggccc
ccgtcgctgggctgggcgctgcttggcacttcatctgggcccggactcggaccgagagtc
gggccgttgctagtgaggcgcggagagaccctgcctgtgcccggaccgcgggtgctggag
acgcggccggcgttgcaagggttgctgggtccagggacgcggctagctgtgactgagctc
cgtgggcgggccaaactgggtccagaggctgagaacagcagccggctccctctcccgccg
gtggtgtcttccttcgcggcctctggcacagtccggcgactacggggcgttctgggaggg
actggagatgcactgggggtgagccggagctgtctccgcagcctcggcctcttccagggc
gaatgggtgtgggtgacccgggctggagagtcatcgaacacttcccagccacatttggcc
acagtccaagtcctagagcctcgctgggacctctctgaaagactgggagccggatctggg
cagccgggagagcctctcgctgacggactggccctcgtgcctgccactctggcttttaat
ctcggctgtgatcccctggacgtgggagagctcaaaatccagaggtatttggagggctcc
agcacccctgaagacaaaggaagctgctcagtgctgcctgggcctccgtttgccaaagag
ttacacatcgaaattgtgtcgtctcctcactacagcactaatgggaactatgaccatgtc
ctttaccggcactttcagacacccagggcagtccaggaaggggatgtcctgtgtgtgcca
acagttgggcaagtagagatcctggaaggaagcccagagaaactgcccaggtggcaagag
atgttttttaaagtgaagaaaacagttggggaggctccagatgggcaagacagagcctac
ttagccgacaccacccatacctccttgtacttggtgggttctaccctgagcctcgttcca
aggcttccttcaggggactccactccctggagcagcttgtctcctccaggcctggaggcc
ttggtgaccgagctctgtgctgccctgaagcctcgcctccagccagggggtgccctgctg
acagggactggcagtgtccttctacggggccccccaggcagtgggaagaccactgcagtc
actgccgcctgcagccgccttgggctccacttattgaaggtgccctgctccagcctctgt
gcagacagtagcggtgctgtggagacaaaactgcaggccactttctcccgggcccggtgt
tgccggccagtggttcttttgctgacagccgtggacctgctgggccgggaccgtgatgga
ctaggcgaggacgcccgggtggtggccacgctgcgtcacctcctgctggatgaagacccg
ctctccagctgccctcccctgctggtcgtggccaccaccagccgggcccaggacctgccc
gcggacatgcagacggcgtttccccatgagctggaggtgcccgtgctagcggaggcgcag
cggctcagcatcctccgggccctcaccgcccacctccccctgggccaagaggtgaacttg
gcgcagctggcgcggcggtgtgcgggctttgtggtgggggatctctatgcccttttgacc
cacagcagccgggcagcctgcagcaggatcaagaactcaggctgggccggcggtttgagt
gaggaggatgagggggagctgtgtgcggcgggcttccctctcctggctgaggacttcggg
caggcgctggagcagctgcaggccgctcactcccaggccatcggagcccccaggatcccc
tcggtgtcctggcatgacgtgggcgggctacaggaggtgaagaaggagattctagagacg
attcagcttcctctggagcaccctgagctgctcagcctgggcctaaggcgctccggcctt
ctgctccacggaccccctggcacgggcaagaccctcctggccaaggcggtggccacggag
tgcagcctcaccttcctcagcgtgaaagggcccgagctcatcaacatgtacgtgggccaa
agcgaggagaatgtacgggaagtgtttgcccgggccagggccgcagctccctgcatcatc
ttctttgatgaactggactccttggccccaaatcgggggcgaagtggagactctggaggt
gtgatggacagggtggtgtcacagctcctggccgagctggacgggcttcacagcacccag
gatgtgttcgtgatcggagccaccaacagaccagacctgctggaccccgccctcctgcgg
cccggcaggtttgacaagctggtgtttgtgggggtgaacgaggaccgcgcctcccagctc
cgtgttctgagcgccatcacacgcaagttcaggctggagccctctgtgagcctggtggac
gtcctcgaccactgcccgccccagctgacgggcgccgacctctactccttatgctccgac
gccatgacagctgccctcaaacgccgagttcgggacctggaggaaggcctggagcccggg
agctcagccctgctgctcaccatggaggacctgctgcaggccgcagcccggctgcagccg
tcggtcagcgagcacgagctgctccggtacaagcgcatccaacgcaagtttgccgcctgc
tag
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