Cervus canadensis (wapiti): 122429440
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Entry
122429440 CDS
T07554
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122429440 (VPS52)
Membrane trafficking [BR:
ccad04131
]
Protein recycling
Others
EARP complex
122429440 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
122429440 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Dor1
Sec3_C-term
COG6_N
ATG16
Motif
Other DBs
NCBI-GeneID:
122429440
NCBI-ProteinID:
XP_043305675
LinkDB
All DBs
Position
28:complement(38989741..39005386)
Genome browser
AA seq
723 aa
AA seq
DB search
MAAAATMAAAARELVLRAGASDMEEEEGPLGGGPGLQEPLQIGELDITSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSA
LVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYY
RSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPAELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMG
RTLSMTQKHLESYLVDCYDAIAVFLCIHIVLRFRNITAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgcgaccatggcggcagctgctcgcgagctggtgttgcgggccggggct
tcagatatggaggaggaggagggcccgctggggggtggtccaggtcttcaggaaccattg
cagattggagagttggacatcacctctgatgaattcatcctggatgaagtggatgttcac
attcaggcgaatctggaggatgagttagtaaaggaagctcttaaaacgggtgtggatctt
cgtcactattcaaagcaggttgagctggagctacagcagattgagcagaaatccattcgg
gattatatccaagagagtgagaacatagcatctctgcacaatcagatcacagcctgcgat
gctgtccttgagcgcatggagcagatgttgggagcttttcagagtgatctcagctccatc
agctctgagatccggacactgcaggaacagtcaggagccatgaacattcgactgcggaac
cgtcaggctgtccgggggaaacttggggagcttgttgatggtctcgtggtgccctctgct
ctggtcacggcaattttggaggcaccagtcacagagccccggttcttggagcagctgcag
gagctggatgctaaggcagctgcggtccgggagcaggaggctagaggcacagcggcctgt
gcagatgtccggggtgtgcttgaccgcctccgagtcaaggccgtgacaaagatccgagag
ttcatccttcagaagatttattccttcagaaagccaatgaccaactatcagatcccacag
acagccctgctgaaatacaggtttttctatcagttcctgctgggcaacgaacgagccact
gcgaaggaaatcagggacgagtacgtggagacgctgagcaagatatatctgtcttactat
cgctcttacctggggcggctcatgaaggtgcagtatgaggaagtcgctgagaaggatgac
ctaatgggcgtggaagatacagccaagaaaggattcttctcaaagccgtccctccgcagc
aggaacaccatcttcaccctggggacccggggctctgtcatctcccccgctgaactggaa
gcccccatccttgtgccccacactgcccagcggggcgagcagaggtatcctttcgaggcc
ctcttccgcagccagcactacgccctcctcgacaactcctgccgtgaatacctcttcatc
tgtgagttctttgtggtgtctggcccggctgcccacgacctgttccacgctgtcatgggc
cgcactctcagcatgacccagaaacacctggagtcttacctcgttgactgttacgatgcc
attgctgttttcctctgcatccacatcgtcctccggttccgcaacatcacagccaagagg
gacgttcctgctctggacaggtactgggagcaggtgctcgccttgttgtggccgcggttc
gagctgatcctggagatgaacgtgcagagcgtccgcagcactgaccctcagcgcctcggc
gggctggacactcggcctcactacatcacgcgccgatatgcagaattctcctcggctctt
gtcagcatcaatcagacgattcccaacgaacggaccatgcagctgctgggccagctccag
gtggaggtggagaattttgtcctccgggtggcagctgagttctcctcgaggaaggagcag
cttgtgtttctgatcaacaactacgacatgatgctgggggtgctgatggagcgggcggct
gatgacagcaaagaggttgaaagtttccagcagctgctcaacgctcggacacaggaattc
attgaagagttgctgtctcccccctttgggggcctggtggcatttgtaaaggaagctgaa
gctttgattgagcgtggacaagcggaacgacttcgaggggaagaagcccgggttactcag
ctgatccgtggcttcggcagttcctggaaatcgtcggtggagtctctgagtcaggatgtg
atgcggagcttcaccaacttcagaaatggaaccagcatcatccagggagctctgacccaa
ctgatccagctctatcatcgcttccaccgggtgctgtctcagccgcagctgcgagccctc
cctgctcgggccgagctcatcaacatccaccacctcatggtggaactaaagaagcacaag
cccaacttctga
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