KEGG   Cervus canadensis (wapiti): 122429519
Entry
122429519         CDS       T07554                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ccad  Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccad03400]
    122429519 (MDC1)
DNA repair and recombination proteins [BR:ccad03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    122429519 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 122429519
NCBI-ProteinID: XP_043305806
LinkDB
Position
28:20227152..20241177
AA seq 1920 aa
MEDTQVLNWEVEEEEQVEESPTESVGYSLEPLGQLHIFSSSYGPEKDFPLYLGKNMIGRM
PDCSVALPFSSISKQHAVIEISAWDKAPVLRDCGSLNGTQILRPPKVLGPGVSHRLRDRE
LILFADLPCQYHRLDVPRPFVSRGPLTVEETPRIQGGTQTPRLLLAEDSEEEADSLLHKC
VVKRARTSLATVVPESDEEGPSPAPDGPGPPSAFNLNSDTDEEESQESGAGDASSAARRG
TTAETEQPEPVTAEVQIEKDQCSVKERNRDTEIKRDVRTGVVSIGVILERSQPSGEGSDT
DLSDESGPPRRLAGVRPKRACNFIDSDTDGEDEGIPATPAVVPMKERQTFHEAGTQSPQA
PGVARRQESPADGDTDIEEGEAPPDRSQASMVIDSNTDDEEEVSAALTLARLRESQAGKW
NRDPDAEEDRAQPVALLERSQASAGGDSDTDVEEEGLPVERRGMVPKGHMDREYSKKSQH
PPRDSDTEGKEDESSPGVYLERSQASAQVEDEVSLGPAVALPEKRQVRGIVWTHHTDVEA
EGGPAQLPVLQSLEEAQPPLAGDCEPDAENTSSAAAGVRKSQLPVEKDAGTTWAAAVPEQ
DRALATGTQGGSSTAPGEQDLLPASRENLADLVVDTGTPGEPPPQREGAQPTTGREREAH
GNRATDSGENLHDSEDLDLPATQCFVDKENQSLEVPSMEDEPTQAFLFPLPQEPGPSCCS
FQATGSLDEAWEVLATQPFCPRESEASETQTAVTLLDTPASCPHPSRTAQQEQHPESPVH
TEPLGMEGRGMQTLEKDMGTPRETAERVIPEGGPLQKETKKLPSEGEREDATGEEELIGA
IQDREQNQVLARDTQSQESDKKVESASTGRGMETVKVEIETPKETQGREREKQTLAGEIF
ESEAGKLVAERESEAGGLEVKGPQELLDRGPQRGETEAGGQDQKGQASGPPPEPGAGAGD
LQGLASDLVASGSQAGGGRGAPGSPRRQQRGDLNCEMPPAEKASRGDQESPKACLPPAAP
EASAPLPNSLISQIQKHPAPQSLLFPSPAPLELPIPRTRQNESQEAPETPFSSELNSVHP
EPKVRPQGSSPVSSLPLEPHPTTPTGQPIALEPTSGVSQSRTHSSFDVTASSVVPTALAL
QPSTSTDQPVTPKPTLRAPRGRAHRSSVKTPEPNVPTDQPVAPELTAKATRGRAQRSSVK
TPKPDNPTTPQPQPSTSTDRPVTPKPTSRGRTPRSSAKTPEPVVPTASELQPAAPKDQPV
APELTSRATRGRTQRSSIKTSKPDTSTTPEPQPSTSTDQPVTPKPTSRAPRGRTPKSSAK
TPEPVVSTASELQPAALTDQPVTPELTSRATRGRTQRSSVKTPDPVTTTTPELQPSTSTD
QLVTPKPTSRAPRGRTRKSSAKTPEPVVPTASELQPSAPADQPVGPWTTQCRRHRSSVKT
PEPVVPTVPEPHSSTSKDQSVALEPTSQATQSQTHRSSVKTSQPTEPTAPDLKPSSPTDE
PVTPKVIAQGGPSRTRRSSTASAVLVPTTPEFQSPVPSEQPLPPDPIPEVNCSRRPRATR
KQGSPTAHVHEPCTTPPEPSSRSSRNQRRGAVKAAKPLSTIPEPAFAQLPEAPPHTPQMP
EEEAADGSGFTPESQPKASQNRKRPSATAHSPPLQKRLQRGKVPQKAASLKEEEENPAAR
PRKEEGVVIPGPGKRKREQTEEESQGRLSRSLRRTKPIQESTAPKVLFTGVVDARGERTV
LALGGSLASSVAEASHLVTDRIRRTVKFLCALGRGIPILSLAWLHESRKAGCFLPPDEYL
VTDPEQEKNFGFSLREALSRARERRLLEGYEIHVTPGVQPPPPQMGEIITCCGGTILASM
PRSYKPQRVVITCSQDFPRCAIPYRVGLPILSPEFLLTGVLKQEVKPEAFAFSTVEMSST
NT seq 5763 nt   +upstreamnt  +downstreamnt
atggaagacacccaggttttaaactgggaagttgaagaagaggagcaggttgaagagagc
cccactgaatccgtggggtatagcttggagcccctagggcagctgcatatcttcagtagt
tcctatggaccggaaaaagacttcccactctacctcgggaagaacatgataggccgaatg
cctgattgctctgtggccctgcccttttcatccatctccaaacaacatgcagtgattgaa
atctctgcctgggacaaggcgcctgttctccgggattgtgggagcctcaatggcactcaa
atcctgcggcctcctaaggtcctgggccctggggtgagtcatcgtttgcgggaccgggag
ttgattctctttgctgacttgccctgccagtaccatcgcttggatgtcccccggcctttt
gtctcccggggccctctaactgtagaggagacacccaggatacagggaggaactcaaacc
cccaggcttctgttggctgaggactcagaggaagaagcagattcccttttgcacaagtgt
gtggtgaaaagagcaaggacctctttggcaacagtcgttccagagagtgatgaagaaggg
ccttcccctgccccagatgggcctgggccaccttctgccttcaacttgaacagcgacaca
gatgaggaagaaagtcaggaatcaggagcaggagatgcctcttcagctgccagaagaggt
accactgcagagacagaacagcctgaacctgtcacagccgaagtccagattgagaaggat
cagtgttctgtgaaggagaggaacagggacacagaaatcaagagggatgtgaggactggg
gttgtttcgattggagtgattctggagaggagccagccttctggggagggcagtgacaca
gatctaagtgatgagagtgggcctccaagaaggcttgctggggtccgtccgaaaagggcc
tgtaacttcatagacagtgataccgatggggaggatgaggggatccctgctaccccagca
gtggttcccatgaaggagaggcagaccttccacgaagctggtacacagagcccccaggca
cctggtgtggcacgtcggcaggagagcccagctgatggtgatacagatatagaggagggg
gaggcccccccggacagaagccaagcctccatggtgatcgacagcaatacagacgatgag
gaggaagtctcggcagcactgacattggcacgtctaagagagagccaggctggtaagtgg
aaccgagatccagatgcagaagaggacagggctcaaccagtggcccttctggaacgaagc
caggcctctgctgggggagacagtgacacagatgtggaggaagaggggctcccagtggaa
aggaggggaatggttcccaagggtcacatggacagggaatattcaaaaaagagccagcat
cctcccagggacagtgatacagaggggaaggaagatgagagctcaccgggggtctacctg
gagagaagccaggcctctgcacaagtggaggacgaggtctcactggggccagctgttgca
cttccggagaagcgtcaggtacgaggcatagtgtggacacatcacaccgatgtggaggca
gaagggggcccggcacagctgcctgtgctgcaaagcctagaggaagcccagcctcctcta
gctggggactgtgaaccagacgcggagaacacatcctcagcagcggccggtgtcagaaag
agccagcttccggtggaaaaagatgctgggaccacgtgggccgcagccgttcctgaacag
gacagagcacttgccaccgggacccagggtgggtcatccacagcaccaggggagcaggac
cttctcccggcctcaagggaaaacctggcagatctggtggtggacacaggcactccaggg
gagcccccaccgcagagagagggggcccagcccaccacaggaagggagagagaagcacat
gggaatagggccacagactctggagagaacctccacgattctgaagatctggacctacca
gctacccagtgctttgtagacaaagagaatcagagcctggaagtccccagcatggaggat
gagcccacccaggccttcctatttcctctgccccaagagcctggcccttcctgttgcagc
ttccaggccacaggttccctggatgaggcatgggaggtcttggcgacacagccattctgt
ccgagagagtctgaggcctctgagacccaaaccgctgtcaccctccttgacacccctgca
tcttgcccccatccatctaggacagcacagcaagagcaacatccagagagcccagtccac
acagagccactggggatggaaggcagagggatgcagactctggagaaagacatgggtacc
ccaagagaaacagcagagagggtgatccctgagggagggccactgcagaaggaaaccaag
aaactgccctcggaaggagagagggaagatgcaacgggagaggaagaattaatcggggca
atacaggacagagaacaaaatcaggtgttagctagagatactcagagccaagaatctgac
aaaaaagtggaaagcgcaagtactggaaggggaatggagactgtgaaggtagagatcgag
acacccaaggaaacacaggggagagagagagaaaagcagacccttgcaggggaaatattt
gagagtgaagcagggaaactggtagcagagagagagagtgaggcaggtgggttagaagtc
aagggaccccaagagctactggacagaggcccacagaggggggagacagaggcggggggc
caggaccagaaaggccaagcctctggtccgccaccagagcctggagcaggggcaggagac
cttcagggacttgcctcagacctagtagcttctgggagccaggcaggtggaggaagggga
gccccagggagccccaggaggcagcagagaggtgacttgaattgtgagatgccacctgct
gagaaggcttccaggggtgatcaggaatccccaaaagcttgtctgcctcctgcagcgcct
gaagcctcagccccactcccaaactccctcatctctcagatccaaaaacatcccgcacct
cagtccctcctttttccctctccagctcctttagaactgcccattcccaggaccagacaa
aatgagagtcaggaagctccagagactcccttctcctcagagctgaactctgtccaccca
gaacccaaagtcaggccccaggggtcctctccagtttcttctctacctcttgagcctcac
cctaccacccccacaggccagcctattgcccttgaacccacctctggggtctctcagagc
aggacacatagttcctttgatgtaactgcctcatcagttgtccccacagcccttgcactg
cagccatccacctccacagaccagcctgtcacccctaagcccacacttcgggcgcctcgg
ggcagggcacataggtcttctgtcaaaacccctgaacccaatgtccccacagaccagcct
gttgcccctgagctcacagctaaggccactcggggcagggcacagaggtcttctgtcaag
actcccaaaccagataaccccacaacaccccagccccagccttctacttccacagaccgg
cctgtcacccccaaacccacatctcggggcaggacacctaggtcttctgccaagactcct
gaaccagttgtccccacagcctctgaactccagcctgctgcccctaaagaccaacctgtt
gctcctgagctcacatctagagccactcggggcaggacacagaggtcttctattaagact
tccaaaccagatacatccacaacccctgagccccagccttccacttccacagaccagcct
gtcacccccaaacccacatctcgggcccctcggggcaggacacctaagtcttctgccaag
actcctgaaccagttgtttccacagcctctgagctccagcctgctgccctcacagaccag
cctgtcactcctgagctcacatctagggctactcggggcaggacacagaggtcctctgtc
aaaacccctgatccagttaccaccaccacacctgagctccagccttccacctccacagac
cagcttgttactcccaaacccacatctcgggcccctcgaggcaggacacgtaagtcgtct
gccaagactcccgaaccagttgttcccacagcttctgagctccagccttctgcccctgca
gaccagcctgttggtccttggaccactcagtgtagaagacataggtcttctgtcaagacc
ccggaaccagttgtccccacagtccctgagcctcattcttccacttctaaagaccagtct
gtcgctcttgaacccacatctcaggccactcagagccaaacacataggtcctctgtcaag
acatcccagccaactgaacccacagcccctgacctcaaaccttcctcccccacagacgag
cctgtcactcccaaggtcatagctcagggtggtccaagcaggacacgaaggtcttctaca
gcaagtgctgtgctggttcctactacccctgaattccagtctccagtcccctcagaacag
cctcttccccctgaccccatccctgaagtcaactgcagcaggaggccgagggccactagg
aaacaagggtctcccacagctcatgttcatgagccctgcaccacaccccctgaacctagc
tcccgctcctcaaggaaccaaagacgaggggcagttaaagcagccaagccccttagcacc
attcctgagcctgcctttgcccagcttcccgaggcaccgcctcacactccccagatgcca
gaggaggaggcagcagatggctcaggcttcaccccagagtcccagcctaaggcctctcaa
aaccgcaagaggccttcagctactgcacattcacctccacttcaaaaacggctccagaga
gggaaagtccctcagaaggcagcatcccttaaggaagaagaagaaaatccagcagcgagg
ccgaggaaggaagagggtgtagtgattccaggtccaggcaagagaaagagagagcagaca
gaggaggagtcccagggaagactgagccgcagcctgcgacggaccaaacctatccaggag
tccacggcccccaaagtgctcttcacgggcgtggtggatgctcgcggagagaggacggtg
ctggccctggggggcagtctggctagctcagtggctgaggcttctcacctggtgactgat
cggatccgccggacggtcaagttcctgtgtgccctgggccggggcatccccatcctctcc
ctggcctggctgcatgagtcccgcaaggcaggctgcttcttgcccccggacgaatatttg
gtgactgatcctgagcaggagaagaacttcggcttcagccttcgggaggccctgagccga
gctcgggagcgaaggctcctggagggctatgagattcacgtgacccccggagtccagcca
ccgccacctcagatgggagaaatcatcacctgctgtggaggcaccatcctagccagcatg
ccccggtcctacaagcctcagagggtcgtgatcacatgttcccaggacttccctcgatgt
gccattccatatcgggttgggctgcccatcctctcacccgagttcctgctgacgggagta
ctcaagcaggaagtcaagccagaggcctttgccttctccactgtggaaatgtcatccacc
tga

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